G35857


Basic Information

Item Value
gene id G35857
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 10984527 ~ 11069095 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU48243
acagtcagacgttcatcgctatcttggcaatgctggagctccttcacagcgtcaaccagcagctcagtttcctctgctgagaagagtttgttgaacacgtccaggtagctgcaccgttacaatagcaatccaccaaagacagagctcacctgatctactcttaaagagaatgatgagaaacagagagacactctgattggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU48243 True 201 lncRNA 0.47 2 10984527 11069095

Neighbor

gene id symbol gene type direction distance location
fam196a fam196a coding downstream 103693 10827410 ~ 10880834 (-)
wbp2 wbp2,LOC107667802,LOC107578800 coding downstream 490341 10487067 ~ 10494186 (-)
mrpl38 mrpl38 coding downstream 508650 10467821 ~ 10475877 (-)
LOC103039991 LOC103039991 coding downstream 534242 10443259 ~ 10450285 (-)
LOC103043647 ttyh2,LOC107654552,LOC107684477 coding downstream 1561816 9314584 ~ 9422711 (-)
ebf3 ebf3,ebf3a,LOC107582179,LOC107745698 coding upstream 827958 11897053 ~ 12038582 (-)
tcerg1l tcerg1l coding upstream 1174186 12243281 ~ 12417270 (-)
ppp2r2d ppp2r2d,LOC107553689,LOC105009682 coding upstream 1506416 12575511 ~ 12603380 (-)
trnaq-cug_2 NA coding upstream 1598741 12667836 ~ 12667907 (-)
trnaq-uug NA coding upstream 1599621 12668716 ~ 12668787 (-)
G35855 dock1,LOC107711371,LOC107740868 non-coding downstream 17159 10942508 ~ 10967368 (-)
G35777 NA non-coding downstream 498151 10485987 ~ 10486376 (-)
LOC111192368 NA non-coding downstream 518305 10465055 ~ 10466222 (-)
G35769 NA non-coding downstream 521527 10461604 ~ 10463000 (-)
G35767 NA non-coding downstream 542954 10439531 ~ 10441573 (-)
G35883 NA non-coding upstream 84869 11153964 ~ 11200009 (-)
G35900 NA non-coding upstream 658260 11727355 ~ 11727575 (-)
G35901 NA non-coding upstream 667227 11736322 ~ 11736532 (-)
G35914 NA non-coding upstream 782031 11851126 ~ 11851366 (-)
G35941 NA non-coding upstream 905994 11975089 ~ 11995220 (-)
rpl38 NA other downstream 1553299 9426075 ~ 9431228 (-)
G35512 NA other downstream 1778616 9204570 ~ 9205911 (-)
tbata NA other downstream 1980631 8938933 ~ 9003896 (-)
G35429 NA other downstream 2056810 8924828 ~ 8927717 (-)
LOC103030829 NA other downstream 4288236 6688167 ~ 6696291 (-)
LOC103036331 NA other upstream 998438 12067533 ~ 12072427 (-)
G36074 NA other upstream 1640713 12709808 ~ 12711545 (-)
lsm5 lsm5,LOC107653262,LOC107727957,LOC107674592 other upstream 2237993 13307088 ~ 13311525 (-)
p4ha1 p4ha1,p4ha1a,LOC107753313,LOC108273903,LOC107560551,LOC107684765 other upstream 2406071 13475166 ~ 13500177 (-)
c4h10orf88 LOC103041415 other upstream 3716857 14785952 ~ 14797212 (-)

Expression


Co-expression Network