Gene
RNA
| Item | Value |
|---|---|
| gene id | G55427 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 7817145 ~ 7817371 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU63040 | True | 227 | lncRNA | 0.37 | 1 | 7817145 | 7817371 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000009_07625693_07637462 | SLC39A10 | coding | downstream | 179683 | 7625554 ~ 7637462 (-) |
| CI01000009_07500752_07541007 | LRCH1 | coding | downstream | 276138 | 7500602 ~ 7541007 (-) |
| CI01000009_07383927_07391805 | ITM2B | coding | downstream | 425151 | 7383654 ~ 7391994 (-) |
| CI01000009_07224625_07229839 | NA | coding | downstream | 586494 | 7224316 ~ 7230651 (-) |
| CI01000009_07064060_07084764 | ZEB2A | coding | downstream | 731927 | 7063797 ~ 7085218 (-) |
| CI01000009_07953250_07953748 | NA | coding | upstream | 135347 | 7952718 ~ 7954139 (-) |
| CI01000009_08050911_08053397 | NA | coding | upstream | 233050 | 8050421 ~ 8053500 (-) |
| CI01000009_08058976_08066474 | STK17B | coding | upstream | 241253 | 8058624 ~ 8066778 (-) |
| CI01000009_08070105_08114631 | PGAP1, HECW2A | coding | upstream | 251328 | 8068699 ~ 8114867 (-) |
| CI01000009_08116450_08117961 | NA | coding | upstream | 299000 | 8116371 ~ 8118398 (-) |
| G55416 | NA | non-coding | downstream | 23573 | 7793358 ~ 7793572 (-) |
| G55409 | NA | non-coding | downstream | 30302 | 7786624 ~ 7786843 (-) |
| G55376 | NA | non-coding | downstream | 57299 | 7759645 ~ 7759846 (-) |
| G55368 | NA | non-coding | downstream | 61540 | 7755380 ~ 7755605 (-) |
| G55356 | NA | non-coding | downstream | 69052 | 7747795 ~ 7748093 (-) |
| G55430 | NA | non-coding | upstream | 1274 | 7818645 ~ 7818944 (-) |
| G55492 | NA | non-coding | upstream | 64392 | 7881763 ~ 7882083 (-) |
| G55499 | NA | non-coding | upstream | 77509 | 7894880 ~ 7895159 (-) |
| G55752 | NA | non-coding | upstream | 281136 | 8098507 ~ 8102665 (-) |
| G55823 | NA | non-coding | upstream | 351110 | 8168481 ~ 8232646 (-) |
| G53515 | NA | other | downstream | 2311897 | 5502395 ~ 5505248 (-) |
| G52828 | NA | other | downstream | 3585676 | 4217420 ~ 4231469 (-) |
| CI01000009_03261739_03262843 | NA | other | downstream | 4555188 | 3261038 ~ 3262843 (-) |
| CI01000009_02885473_02893975 | NA | other | downstream | 4917738 | 2883688 ~ 2893975 (-) |
| G52410 | NA | other | downstream | 5254612 | 2551724 ~ 2562533 (-) |
| G55814 | NA | other | upstream | 608450 | 8425821 ~ 8428012 (-) |
| CI01000009_08858198_08860555 | NA | other | upstream | 1040781 | 8856310 ~ 8860563 (-) |
| G59097 | NA | other | upstream | 4470846 | 12288217 ~ 12289518 (-) |
| CI01000009_13975122_13976026 | NA | other | upstream | 6158017 | 13975099 ~ 13978614 (-) |
| G59490 | NA | other | upstream | 6216193 | 14033564 ~ 14037873 (-) |
