CI01000009_08116450_08117961


Basic Information

Item Value
gene id CI01000009_08116450_08117961
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 8116371 ~ 8118398 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_08116450_08117961.mRNA
ATTCACGTAAAGCCAAGTAGACAAATATTGTTTTGTATTACTGTTGTTTATTCACAATGCTGGAAAAATGAGTAGAGGAATTGTTGCCACGAGAACCTCTCAGAACCATTCAGTCTGATTCTTTAACGAATTGGTCAGCTCGGTTTGAGAACCGATTCAAATGATTCATTTAAATAAACCGACTCAAAAGAGCAGTTTGTGAACAAATTGGACACCCCTACTATAAAATGTGTTAAACGTATTCTCTTTACAATCAACACACATAATATAAATTGAATTAATAATTTAAATAAAGTGTAAATCTTTTCTGTCCGAAAAATACTGATATATTGTTCAAATCCGTTATGTTTATCTGTAAATGTGGAACTATTCTCTCTTTAGTATGTTGTCAGTCGGATTTTTCTAACAGATGGGCCCCTGAGGATGATGGGAGAAAGATGGCGCTGCCCTTACTGAGGTGCAGTAGCTGTAACAGGCCCGTTTCCATTCTGATCCGGTACTTTACATCAAAGCCACTTTTAGTGAATCAGTCCAGACGACTCGCCCCCGTGTCGTCTGCTGTGTGGAATGTTCGTCAGTACTCTGAGCGGGGGAGACACAAACAGAACCAAAAGGTTGTGGTTGTCGGCATCCCGAACCCCTTCATCTGGTTCCGAACCCGCATCTACTTCTTTCTCATCCGAACTTACTTCGACAAAGAGTTTAGCATCGAGGAGTTCACGGAAGGAGCCAAACAGGCTTTCTCACATGTTTCAAGATTGCTGTCTCAGTGTCAGTTTGAGTCTCTTGAGGGATTAGTGGCTAAAGATCTAATAGAAAAACTTGAGGAAAAATGCGCTCATCTGCCTTTGAGCCACCAGAGGGCGCTGTCAGCCGAGTCTGATGAGATCATGTACACAACAACTGGAGATGTGGGCATTTACTATGATGATAGCGGGAGGAAATTTGTAAGTATTTTGATGCGCTTCTGGTACTTAACTAGTGCCAGAATTCCTGATGACAGTATGGAGGGAGCGAGAATTTTCCAGGTTGCCGTTGGTGGAGAGGGAGAGAGACCAGAGACCAAGAGATTGCTTACAGCCAATTATGAGTGAGTATTGTGATTACTCTTTTTATTGTTCATGTATTGCGTCTCGTAGTGAGATTGAGATAGATTGCAAGATTCTTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_08116450_08117961.mRNA True 1173 mRNA 0.41 4 8116371 8118398

Neighbor

gene id symbol gene type direction distance location
CI01000009_08070105_08114631 PGAP1, HECW2A coding downstream 1504 8068699 ~ 8114867 (-)
CI01000009_08058976_08066474 STK17B coding downstream 49593 8058624 ~ 8066778 (-)
CI01000009_08050911_08053397 NA coding downstream 62871 8050421 ~ 8053500 (-)
CI01000009_07953250_07953748 NA coding downstream 162232 7952718 ~ 7954139 (-)
CI01000009_07625693_07637462 SLC39A10 coding downstream 478909 7625554 ~ 7637462 (-)
CI01000009_08121789_08159923 LRRFIP1A coding upstream 2321 8120719 ~ 8159923 (-)
CI01000009_08207210_08207823 NA coding upstream 88721 8207119 ~ 8207971 (-)
CI01000009_08208406_08220935 NA coding upstream 89803 8208201 ~ 8221327 (-)
CI01000009_08224923_08231059 NA coding upstream 106478 8224876 ~ 8231483 (-)
CI01000009_08283637_08293491 TRIM63B, TRIM63 coding upstream 164960 8283358 ~ 8293491 (-)
G55752 NA non-coding downstream 13706 8098507 ~ 8102665 (-)
G55499 NA non-coding downstream 221212 7894880 ~ 7895159 (-)
G55492 NA non-coding downstream 234288 7881763 ~ 7882083 (-)
G55430 NA non-coding downstream 297427 7818645 ~ 7818944 (-)
G55427 NA non-coding downstream 299000 7817145 ~ 7817371 (-)
G55823 NA non-coding upstream 50083 8168481 ~ 8232646 (-)
G55819 NA non-coding upstream 126093 8244491 ~ 8246096 (-)
G55815 NA non-coding upstream 143768 8262166 ~ 8263697 (-)
G55868 NA non-coding upstream 159145 8277543 ~ 8278157 (-)
G55872 NA non-coding upstream 176353 8294751 ~ 8295043 (-)
G53515 NA other downstream 2611123 5502395 ~ 5505248 (-)
G52828 NA other downstream 3884902 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 4854414 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 5216964 2883688 ~ 2893975 (-)
G52410 NA other downstream 5553838 2551724 ~ 2562533 (-)
G55814 NA other upstream 307423 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 739754 8856310 ~ 8860563 (-)
G59097 NA other upstream 4169819 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 5856990 13975099 ~ 13978614 (-)
G59490 NA other upstream 5915166 14033564 ~ 14037873 (-)

Expression


Co-expression Network