CI01000009_08208406_08220935


Basic Information

Item Value
gene id CI01000009_08208406_08220935
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 8208201 ~ 8221327 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_08208406_08220935.mRNA
ACTAACATAAGTGGACCCCAAGCAAAATAAGATCATAAAATGTTAAATTAAAAAAATAAAAAAGTTTTTATAAGTAGATTCAACCCAAGTATGAATGGATGCCAGTCTAATGACAGAATGGAAAATGCAACATAACCATTTCGTTTACAAATATGCTCACTCCCAAATGTTATTGCATATTAAACCTTTGATGTGGCCATTCATTCTCAAGGAAATGAGCTGAAATAAACTGTTCAACCTGTGAGAAGTAAATTACTTGTTTATACTAGCTGGGTGCTAGCATGCAATTAATGAGGCCGAATCATTATTTGTTCTGTCTCTGAAAACTATTCTACACGTTTGGTAACAAAGAATCATTGTGATTTGGTTTACTGGCTTCCTCAATCTACCAGATGAGATTCAAGATGATGCCCAGCAGCAGCAATGGGAAGAGTTTGGATCTCTCCAGGCTGACAGATGATGAAGCCAAGCACGTTTGGCAGGTGATCCAGAGAGACTTTCATCTGCGACAGAAAGAAGAGGACAGGCTAGGGGAACTCAAGACCAAAATAATGAAAGAGGATACGAAGAGAGAGCTGCTGGAATATCAGCCTAAACTCAGTGATTCACTCTGCATCCGCTGTCTGCAACCCTTCAAATTCCTTGTCAACAACAAGCGCCAGTGTCTGGATTGCAAGCTATTTGTCTGCAAGTCCTGCAGCCGTTTTAACAAGAAGGACCGCGGTTGGGTGTGTGATCCATGCCACATGTCCAGAATCCTTAAGATTGGAACTCTGGAATGGTTCCATGAGAATGTACGCTCTCGCTTCAAGCGTTTTGGCAGTGCAAAGGTCATGAATTCACTTTTCAAGAGGCTGAACAGCGACCGTGCCTGCTCTCAAACTGACCTCAGAGTGCCTGGACTCGAGTGTCTCTCTTTTATCCAATTTTCAAGCTCTGTCTGTCCTGAATACAGAGCTGGCTCTCTGTTTAACCAGGAAGATGAGCAATCTGAGAGGGCCGACAGACGCCACTTCAGCCTGATGAGAAAAGGCAGACGGCTGCTTCCTGTTGATCCCCTTGAATTTAATATTGGCGTTGAGAACTCCGCCTATTCCCGTACCCCCTTACTTCTGGTTCTAGATGACTGCACACCACACCTAGAACAGAGGATGACAAAATCTCGTTCCCTCTCCAAGATGAGTCTCTCTTCAGCTGGCAGCGCTAACTATCACCTCCACCGTGAGCTTTCTTACAGCCTGGAAGACTCAGAGGATGATGATGAATCTGAGATGAATGTCATATACAGTCCTGCCCTACTTAGGGAGCCCTCACCAGATGAGGTTCCTCCACAGATTATTGAGCTCAACATGCGTATGTCAGCAATCGAGACTCTTCTGAGCCGTTTGGAGAAGAAAATTGCCTTACCGGTAATTGGGGGATCAACAGAACTGGTTGAGCAGAAGGTGGAAGATTTGTCTCCAGCTGACTTAGAGGAGCTTGAGCTCAGAAAAAAGCTTGATGAACTTACTGAAAAAATAAGTGACAAAGGCCTGTCGTCTGATGAGGAGGATGCAACGAAATCTTCAGAGGACTCTCCAAAGAAAGGGGCCCTTTACCATGCTTCAACTATGAGAGGAGCTTCAGCTGGACTTGGAAATGTCAGACATGAGTGGCCCCTTGAGGTTGAATGGAAAGCAAAGCCGAATATACATAAATCCTTAAAAAAGCAGAAGCGGGTGAGTTCCTTTGAGTTTAGTAATACAACCAGCTGTGAACTGTCGCAACTAGAGGGTAAAGTTGCAATGGCAGCCGCCAGTGTCCAGAGCACTCAAAGCGGGGTTACAGACATTCAGAAAAGAATCGCTGCTTTGAGTGCTGCAGGGATGACAGTGGAGACGTCCCGCAGACGGAGGAGGTATAAATTAGTGGATCAGGCTATCCAGATGAGAATATCCTCAACCTCTGAGAACGACTCAAGAAAGCTGCTCAGAAGTTCTTTCATATACTCACGGCTATGACAAGACCATAAGATCTCGAATCCTCTGAATAACTGCTACTTTGAAGACAAGACACATTTATGCTGCTTCTGCATTAAAGGATTTTTCATCTGACAGTTGAGGAACACAGAATACCAAGAGGTGAACAGCTTACAACGTCCTGTAAGTGTCAATGCATTGTAATTTACAAAATATGGTTTAGAAGACTATTTTACCATTTAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_08208406_08220935.mRNA True 2205 mRNA 0.44 12 8208201 8221327

Neighbor

gene id symbol gene type direction distance location
CI01000009_08207210_08207823 NA coding downstream 230 8207119 ~ 8207971 (-)
CI01000009_08121789_08159923 LRRFIP1A coding downstream 48278 8120719 ~ 8159923 (-)
CI01000009_08116450_08117961 NA coding downstream 89803 8116371 ~ 8118398 (-)
CI01000009_08070105_08114631 PGAP1, HECW2A coding downstream 93334 8068699 ~ 8114867 (-)
CI01000009_08058976_08066474 STK17B coding downstream 141423 8058624 ~ 8066778 (-)
CI01000009_08224923_08231059 NA coding upstream 3549 8224876 ~ 8231483 (-)
CI01000009_08283637_08293491 TRIM63B, TRIM63 coding upstream 62031 8283358 ~ 8293491 (-)
CI01000009_08299725_08300042 NA coding upstream 77857 8299184 ~ 8300949 (-)
CI01000009_08337497_08351090 INTS6 coding upstream 115691 8337018 ~ 8352070 (-)
CI01000009_08363231_08372375 DHRS12 coding upstream 141844 8363171 ~ 8372438 (-)
G55752 NA non-coding downstream 105536 8098507 ~ 8102665 (-)
G55499 NA non-coding downstream 313042 7894880 ~ 7895159 (-)
G55492 NA non-coding downstream 326118 7881763 ~ 7882083 (-)
G55430 NA non-coding downstream 389257 7818645 ~ 7818944 (-)
G55427 NA non-coding downstream 390830 7817145 ~ 7817371 (-)
G55819 NA non-coding upstream 23164 8244491 ~ 8246096 (-)
G55815 NA non-coding upstream 40839 8262166 ~ 8263697 (-)
G55868 NA non-coding upstream 56216 8277543 ~ 8278157 (-)
G55872 NA non-coding upstream 73424 8294751 ~ 8295043 (-)
G55886 NA non-coding upstream 156760 8378087 ~ 8387297 (-)
G53515 NA other downstream 2702953 5502395 ~ 5505248 (-)
G52828 NA other downstream 3976732 4217420 ~ 4231469 (-)
CI01000009_03261739_03262843 NA other downstream 4946244 3261038 ~ 3262843 (-)
CI01000009_02885473_02893975 NA other downstream 5308794 2883688 ~ 2893975 (-)
G52410 NA other downstream 5645668 2551724 ~ 2562533 (-)
G55814 NA other upstream 204494 8425821 ~ 8428012 (-)
CI01000009_08858198_08860555 NA other upstream 636825 8856310 ~ 8860563 (-)
G59097 NA other upstream 4066890 12288217 ~ 12289518 (-)
CI01000009_13975122_13976026 NA other upstream 5754061 13975099 ~ 13978614 (-)
G59490 NA other upstream 5812237 14033564 ~ 14037873 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location