G28634


Basic Information

Item Value
gene id G28634
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 56190489 ~ 56190689 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU38440
CATGATATAACATAGCATAACATTGACTACAGTAGCATAACACAGCATATCATAACAACATTACAAAACATATCACAGCATAGGATTGCCTtggtatatttattataatatatggtCAGACTGAACCAATAATTCAGCACTCAATAAATTAAGTATAACATGCTTTACATTCATATTAGACACAGGCATAGACCATGTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38440 True 201 lncRNA 0.31 1 56190489 56190689

Neighbor

gene id symbol gene type direction distance location
LOC103032431 LOC108424505 coding downstream 2634 56173457 ~ 56187855 (-)
gpr176 gpr176 coding downstream 19686 56153714 ~ 56170803 (-)
mthfd1l mthfd1l,si:ch211-266i18.6,LOC107665399 coding downstream 64929 56055205 ~ 56125560 (-)
LOC103043128 NA coding downstream 147204 55949627 ~ 56043285 (-)
armt1 armt1 coding downstream 259303 55924510 ~ 55931186 (-)
LOC103029201 LOC103029201 coding upstream 50282 56240971 ~ 56252577 (-)
LOC103033540 fntb,LOC108424508,LOC107668263,LOC107756604,LOC107721314,LOC107671778,LOC103359368 coding upstream 83797 56274486 ~ 56289838 (-)
zfyve1 zfyve1,LOC107721321 coding upstream 521928 56712617 ~ 56723774 (-)
rhov rhov,LOC107602886,LOC107659156,LOC107668201,LOC107562688,LOC107721274 coding upstream 564700 56755389 ~ 56758766 (-)
chac1 chac1,LOC107721326,LOC107739370,LOC107659180,LOC107668209 coding upstream 629796 56820485 ~ 56823051 (-)
G28617 NA non-coding downstream 42751 56147176 ~ 56147738 (-)
G28606 NA non-coding downstream 60757 56129195 ~ 56129732 (-)
G28604 NA non-coding downstream 63965 56126157 ~ 56126524 (-)
G28567 NA non-coding downstream 295650 55894509 ~ 55894839 (-)
G28568 NA non-coding downstream 300386 55886323 ~ 55890103 (-)
G28661 NA non-coding upstream 23855 56214544 ~ 56227854 (-)
G28657 srsf5,LOC103029514,LOC107756601,LOC107549086,LOC107602033,LOC107721313 non-coding upstream 42018 56232707 ~ 56239723 (-)
G28728 LOC108415780 non-coding upstream 296524 56487213 ~ 56509688 (-)
LOC111189610 NA non-coding upstream 398005 56588694 ~ 56614067 (-)
G28813 NA non-coding upstream 634007 56824696 ~ 56825001 (-)
G28536 NA other downstream 373891 55815872 ~ 55816598 (-)
gtf2h5 gtf2h5,tf2h5,LOC107721375,LOC107659223 other downstream 549114 55634532 ~ 55641375 (-)
G28501 nrbp1,LOC103372645,LOC105015343,LOC106537236,LOC102314540 other downstream 583603 55602870 ~ 55606886 (-)
LOC111189318 NA other downstream 688729 55499900 ~ 55501760 (-)
mixl1 lin9,LOC107678835,LOC107726751,LOC107697095 other downstream 745820 55432081 ~ 55444669 (-)
LOC103031416 dpf3,LOC108424513,LOC107659173,LOC107721322,LOC107668213,LOC108257599,LOC107562702,LOC107602065 other upstream 449662 56640351 ~ 56694835 (-)
ppp4r4 ppp4r4,LOC107711657 other upstream 1621573 57812262 ~ 57841318 (-)
LOC103041090 LOC103041090,LOC108424449 other upstream 1800952 57991641 ~ 57995476 (-)
LOC111189852 LOC108411318,LOC108257913,LOC107721335,LOC102302990,LOC102081001 other upstream 1968518 58159207 ~ 58174704 (-)
G29317 eif5,LOC103022293,LOC107561927,LOC107746071,LOC108435020,LOC107589079,LOC107701513,LOC107582488 other upstream 2742274 58932963 ~ 58934789 (-)

Expression


Co-expression Network