G29417


Basic Information

Item Value
gene id G29417
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 59324993 ~ 59325712 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU39464
ccccccccttaacgcgcaactccCGGGGCGCGAAAAACAAAACCCCAGGAGCAGGTCAGGAGAGGgcggaaaacaaagaacaagacaagacagaactAGGACGGAGaccggacagggaactggacaggagaccgGACATGAAACGGGGGCAGGACCGGGAACGGACACTGGACGTGGGGCTGGGCAGGGGACACAaagggagacggagactggacaggtgacagagactggacataaGGCCGTACTGGGGACTGGACACTGGACAGGACAGGAGACTGGGGCATGACACTGGACACAGACTGAACATGGggcaaggactggacagggGACCGAACAGAAGACGGGGACTGGacaaaactggacaggggaactgGAACCATAACAGTGACGGGGACAGAAACAAATACAGTGACTGGGACGGGAACAGAaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39464 True 432 lncRNA 0.40 2 59324993 59325712

Neighbor

gene id symbol gene type direction distance location
ccm2 ccm2 coding downstream 328231 58976662 ~ 58996762 (-)
LOC111189957 enpp5,LOC107746078,LOC107561943,LOC107701510 coding downstream 372108 58947653 ~ 58952885 (-)
LOC103037326 enpp5,LOC107561943,LOC107701510,LOC107746078 coding downstream 382796 58934892 ~ 58942197 (-)
LOC103031445 thbs1b,thbs1,LOC103031445,LOC108410805,LOC107671781,LOC107721311,LOC107549089 coding downstream 731067 58582728 ~ 58593926 (-)
LOC103032305 LOC103032305,LOC108444535 coding downstream 822462 58498747 ~ 58502531 (-)
LOC103026850 LOC108435006,LOC107589054,LOC107723250,LOC107746162,LOC107697321,LOC104922452 coding upstream 33115 59358827 ~ 59434313 (-)
LOC103027424 si:ch211-278j3.3,LOC108435005,LOC108257871,LOC107723221,LOC107589055,LOC105897761 coding upstream 119799 59445511 ~ 59486743 (-)
eif2b4 eif2b4 coding upstream 237117 59562829 ~ 59573611 (-)
LOC103030505 LOC103030505,LOC108434978 coding upstream 273708 59599420 ~ 59608991 (-)
LOC107197813 NA coding upstream 374322 59700034 ~ 59704083 (-)
G29393 NA non-coding downstream 81158 59236497 ~ 59243835 (-)
G29370 NA non-coding downstream 191321 59133411 ~ 59133672 (-)
G29369 NA non-coding downstream 192856 59131541 ~ 59132137 (-)
G29291 NA non-coding downstream 436584 58888118 ~ 58888409 (-)
G29279 NA non-coding downstream 461498 58862851 ~ 58863495 (-)
G29480 NA non-coding upstream 117067 59442779 ~ 59443002 (-)
G29492 NA non-coding upstream 228619 59554331 ~ 59559664 (-)
G29494 NA non-coding upstream 248616 59574328 ~ 59574536 (-)
LOC111190079 NA non-coding upstream 250526 59576238 ~ 59578395 (-)
G29509 NA non-coding upstream 281463 59607175 ~ 59607846 (-)
LOC103023855 xkr6b,xkr6,LOC103023855,LOC108435015,LOC107746102,LOC107701509,LOC108258067,LOC107589046,LOC107723320,LOC107684793 other downstream 239107 58998541 ~ 59085886 (-)
G29317 eif5,LOC103022293,LOC107561927,LOC107746071,LOC108435020,LOC107589079,LOC107701513,LOC107582488 other downstream 390204 58932963 ~ 58934789 (-)
LOC111189852 LOC108411318,LOC108257913,LOC107721335,LOC102302990,LOC102081001 other downstream 1150289 58159207 ~ 58174704 (-)
LOC103041090 LOC103041090,LOC108424449 other downstream 1329517 57991641 ~ 57995476 (-)
ppp4r4 ppp4r4,LOC107711657 other downstream 1483675 57812262 ~ 57841318 (-)
G29478 NA other upstream 111888 59437600 ~ 59438298 (-)
snx17 snx17 other upstream 181214 59506926 ~ 59552910 (-)
LOC103034188 LOC108434976 other upstream 823685 60149397 ~ 60162066 (-)
LOC103035785 ppm1a,LOC108434987,LOC108258036 other upstream 1025560 60351272 ~ 60364744 (-)
LOC111191938 NA other upstream 1043334 60369046 ~ 60369614 (-)

Expression


Co-expression Network