G113912


Basic Information

Item Value
gene id G113912
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 26629483 ~ 26629760 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU153915
caaatcaaatcatcaaatcaaatttatttgtatagcgctttttacaactggtgttggcacaaagcagctttacagaaacatgattacaggacaaagaatcaggcaaaacattaaacatagaatatacataatacagaacccccagtgagcgcggaggcaaggaaaaactccctcagagctgcaggaggaggaagaaaccttgggaggaccaagactcacattaaaggggggaccatcctaccactggtcaaatggcttttaaattaattttaaaaagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153915 True 278 lncRNA 0.40 1 26629483 26629760

Neighbor

gene id symbol gene type direction distance location
gcnt7 NA coding downstream 327088 26292415 ~ 26302395 (-)
eya2 eya2,LOC107666141,LOC106565282 coding downstream 422913 26152447 ~ 26206570 (-)
LOC103030576 LOC108431845,LOC107696435,LOC108271496,LOC107560513,LOC107666154,LOC100690876 coding downstream 527962 26091651 ~ 26101521 (-)
LOC103035347 si:ch211-59d13.2,slc12a5,LOC107744354,LOC107740262 coding downstream 610036 25711231 ~ 26019447 (-)
LOC103025798 LOC108424712,LOC103354899,LOC108435855 coding downstream 1048557 25578698 ~ 25580926 (-)
cdh22 cdh22,LOC107553911,LOC107666158,LOC107587604,LOC107681302 coding upstream 94037 26723797 ~ 27069232 (-)
znfx1 NA coding upstream 663799 27293559 ~ 27317236 (-)
LOC111193752 NA coding upstream 687648 27317408 ~ 27319945 (-)
ddx27 ddx27,LOC107587605,LOC107681294,LOC107553908 coding upstream 694109 27323869 ~ 27344463 (-)
snrpb snrpb,LOC108272150 coding upstream 717707 27347467 ~ 27352451 (-)
G113915 NA non-coding downstream 13279 26615936 ~ 26616204 (-)
G113913 NA non-coding downstream 34787 26594421 ~ 26594696 (-)
G113901 NA non-coding downstream 143471 26485683 ~ 26486012 (-)
G113899 NA non-coding downstream 147652 26481614 ~ 26481831 (-)
G113887 tfap2c,LOC102234024 non-coding downstream 242617 26344171 ~ 26386866 (-)
G113917 NA non-coding upstream 3217 26632977 ~ 26633227 (-)
LOC111193690 NA non-coding upstream 3963 26633723 ~ 26636302 (-)
G113942 NA non-coding upstream 58969 26688729 ~ 26689126 (-)
G113944 NA non-coding upstream 187412 26817172 ~ 26879547 (-)
G113949 NA non-coding upstream 496405 27126165 ~ 27126369 (-)
G113888 NA other downstream 236286 26346140 ~ 26393197 (-)
G113826 NA other downstream 567199 26032895 ~ 26062284 (-)
ctsa NA other downstream 942906 25635304 ~ 25686577 (-)
tnni1 tnni1,tnni1b,LOC103040607,LOC106582713 other downstream 2612682 24004549 ~ 24016801 (-)
G113304 NA other downstream 2727985 23901123 ~ 23901498 (-)
G114134 kcnq2,LOC107758168,LOC107665991,LOC107558155 other upstream 1495476 28125236 ~ 28129856 (-)
G114270 NA other upstream 1718505 28348265 ~ 28361481 (-)
G114304 NA other upstream 1953633 28583393 ~ 28584959 (-)
ndufa4l2 ndufa4l2,LOC107385343 other upstream 2517676 29147436 ~ 29162803 (-)
LOC103044966 tardbp,LOC108427558,LOC107666995,LOC107713527,LOC107555974 other upstream 2649056 29278816 ~ 29284782 (-)

Expression


Co-expression Network