LOC111193752


Basic Information

Item Value
gene id LOC111193752
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 27317408 ~ 27319945 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002650695.1
CGAAACCTATAGCGCTGTATTTAATCTCAGAGAGAAGCTCGGCTCCACAGAATAGCGAGAACGCAGACAGAGGAGCAGAAGAGCCGGAAATTTGCACAGAAGAGAAGTTGAAGCATGGAGAATGGTCAAAGACGagGGGCAGGTGGAGGTTATAGAGGAGGtggcagaggaagaggaggtgcaggaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002650695.1 True 189 ncRNA 0.51 3 27317408 27319945

Neighbor

gene id symbol gene type direction distance location
znfx1 NA coding downstream 172 27293559 ~ 27317236 (-)
cdh22 cdh22,LOC107553911,LOC107666158,LOC107587604,LOC107681302 coding downstream 248176 26723797 ~ 27069232 (-)
gcnt7 NA coding downstream 1015013 26292415 ~ 26302395 (-)
eya2 eya2,LOC107666141,LOC106565282 coding downstream 1110838 26152447 ~ 26206570 (-)
LOC103030576 LOC108431845,LOC107696435,LOC108271496,LOC107560513,LOC107666154,LOC100690876 coding downstream 1215887 26091651 ~ 26101521 (-)
ddx27 ddx27,LOC107587605,LOC107681294,LOC107553908 coding upstream 3924 27323869 ~ 27344463 (-)
snrpb snrpb,LOC108272150 coding upstream 27522 27347467 ~ 27352451 (-)
LOC103032591 itcha,LOC108431834,LOC108271999,LOC107681287,LOC107666068 coding upstream 38243 27358188 ~ 27385149 (-)
LOC103038159 cbfa2t2,LOC107681292,LOC107740270,LOC107666150 coding upstream 193454 27513399 ~ 27563022 (-)
tox2 tox2,LOC107681298,LOC107666148,LOC106565275 coding upstream 354762 27674707 ~ 27892086 (-)
G113964 NA non-coding downstream 44285 27272850 ~ 27273123 (-)
G113956 NA non-coding downstream 119217 27197903 ~ 27198191 (-)
LOC111193691 NA non-coding downstream 127809 27160762 ~ 27189599 (-)
G113949 NA non-coding downstream 191039 27126165 ~ 27126369 (-)
G113944 NA non-coding downstream 437861 26817172 ~ 26879547 (-)
LOC111193753 NA non-coding upstream 145999 27465944 ~ 27467318 (-)
LOC111193754 NA non-coding upstream 302847 27622792 ~ 27623735 (-)
G114074 NA non-coding upstream 322488 27642433 ~ 27645421 (-)
G114081 NA non-coding upstream 420126 27740071 ~ 27742552 (-)
G114082 NA non-coding upstream 448659 27768604 ~ 27834766 (-)
G113888 NA other downstream 924211 26346140 ~ 26393197 (-)
G113826 NA other downstream 1255124 26032895 ~ 26062284 (-)
ctsa NA other downstream 1630831 25635304 ~ 25686577 (-)
tnni1 tnni1,tnni1b,LOC103040607,LOC106582713 other downstream 3300607 24004549 ~ 24016801 (-)
G113304 NA other downstream 3415910 23901123 ~ 23901498 (-)
G114134 kcnq2,LOC107758168,LOC107665991,LOC107558155 other upstream 805291 28125236 ~ 28129856 (-)
G114270 NA other upstream 1028320 28348265 ~ 28361481 (-)
G114304 NA other upstream 1263448 28583393 ~ 28584959 (-)
ndufa4l2 ndufa4l2,LOC107385343 other upstream 1827491 29147436 ~ 29162803 (-)
LOC103044966 tardbp,LOC108427558,LOC107666995,LOC107713527,LOC107555974 other upstream 1958871 29278816 ~ 29284782 (-)

Expression


Co-expression Network