G113956


Basic Information

Item Value
gene id G113956
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 27197903 ~ 27198191 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU153966
cagacagcttcctcttacagcgtccacagttaatcctgttggatgtggttggttctttttggtggtatgctgacattaccctggataccgtggctcttgatgcatcactaagacttgctgtcttggtcacagatgctccagcaagacgtgcaccaacaatttgtcctcttttgaactctggtatgtcacccataatgttgtgtgcattgcaatattttgagtaaaactgtgctcttaccctgataattgaaccttcacactcatactgctcttactggtgcaatgtgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153966 True 289 lncRNA 0.44 1 27197903 27198191

Neighbor

gene id symbol gene type direction distance location
cdh22 cdh22,LOC107553911,LOC107666158,LOC107587604,LOC107681302 coding downstream 128671 26723797 ~ 27069232 (-)
gcnt7 NA coding downstream 895508 26292415 ~ 26302395 (-)
eya2 eya2,LOC107666141,LOC106565282 coding downstream 991333 26152447 ~ 26206570 (-)
LOC103030576 LOC108431845,LOC107696435,LOC108271496,LOC107560513,LOC107666154,LOC100690876 coding downstream 1096382 26091651 ~ 26101521 (-)
LOC103035347 si:ch211-59d13.2,slc12a5,LOC107744354,LOC107740262 coding downstream 1178456 25711231 ~ 26019447 (-)
znfx1 NA coding upstream 95368 27293559 ~ 27317236 (-)
LOC111193752 NA coding upstream 119217 27317408 ~ 27319945 (-)
ddx27 ddx27,LOC107587605,LOC107681294,LOC107553908 coding upstream 125678 27323869 ~ 27344463 (-)
snrpb snrpb,LOC108272150 coding upstream 149276 27347467 ~ 27352451 (-)
LOC103032591 itcha,LOC108431834,LOC108271999,LOC107681287,LOC107666068 coding upstream 159997 27358188 ~ 27385149 (-)
LOC111193691 NA non-coding downstream 8304 27160762 ~ 27189599 (-)
G113949 NA non-coding downstream 71534 27126165 ~ 27126369 (-)
G113944 NA non-coding downstream 318356 26817172 ~ 26879547 (-)
G113942 NA non-coding downstream 508777 26688729 ~ 26689126 (-)
LOC111193690 NA non-coding downstream 561601 26633723 ~ 26636302 (-)
G113964 NA non-coding upstream 74659 27272850 ~ 27273123 (-)
LOC111193753 NA non-coding upstream 267753 27465944 ~ 27467318 (-)
LOC111193754 NA non-coding upstream 424601 27622792 ~ 27623735 (-)
G114074 NA non-coding upstream 444242 27642433 ~ 27645421 (-)
G114081 NA non-coding upstream 541880 27740071 ~ 27742552 (-)
G113888 NA other downstream 804706 26346140 ~ 26393197 (-)
G113826 NA other downstream 1135619 26032895 ~ 26062284 (-)
ctsa NA other downstream 1511326 25635304 ~ 25686577 (-)
tnni1 tnni1,tnni1b,LOC103040607,LOC106582713 other downstream 3181102 24004549 ~ 24016801 (-)
G113304 NA other downstream 3296405 23901123 ~ 23901498 (-)
G114134 kcnq2,LOC107758168,LOC107665991,LOC107558155 other upstream 927045 28125236 ~ 28129856 (-)
G114270 NA other upstream 1150074 28348265 ~ 28361481 (-)
G114304 NA other upstream 1385202 28583393 ~ 28584959 (-)
ndufa4l2 ndufa4l2,LOC107385343 other upstream 1949245 29147436 ~ 29162803 (-)
LOC103044966 tardbp,LOC108427558,LOC107666995,LOC107713527,LOC107555974 other upstream 2080625 29278816 ~ 29284782 (-)

Expression


Co-expression Network