G113944


Basic Information

Item Value
gene id G113944
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035909.1
NCBI id CM008312.1
chromosome length 44161018
location 26817172 ~ 26879547 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU153954
cctgaaatggttttccaacagtcttgaaggaaggagttcccagaggtgtttattagcacttgttgctcctttgccttcttcactctgtgctccagctcaccccaaaccatctggattgggttcaggtctggtgactgtagaggacagctcattttttgttaagtacataaaactccacatgtgttcattcatagttttgatgccttcagtgagaatctacaatgtaaatagtcatgaaaataaagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153954 True 247 lncRNA 0.41 2 26817172 26879547

Neighbor

gene id symbol gene type direction distance location
gcnt7 NA coding downstream 514777 26292415 ~ 26302395 (-)
eya2 eya2,LOC107666141,LOC106565282 coding downstream 610602 26152447 ~ 26206570 (-)
LOC103030576 LOC108431845,LOC107696435,LOC108271496,LOC107560513,LOC107666154,LOC100690876 coding downstream 715651 26091651 ~ 26101521 (-)
LOC103035347 si:ch211-59d13.2,slc12a5,LOC107744354,LOC107740262 coding downstream 797725 25711231 ~ 26019447 (-)
LOC103025798 LOC108424712,LOC103354899,LOC108435855 coding downstream 1236246 25578698 ~ 25580926 (-)
znfx1 NA coding upstream 414012 27293559 ~ 27317236 (-)
LOC111193752 NA coding upstream 437861 27317408 ~ 27319945 (-)
ddx27 ddx27,LOC107587605,LOC107681294,LOC107553908 coding upstream 444322 27323869 ~ 27344463 (-)
snrpb snrpb,LOC108272150 coding upstream 467920 27347467 ~ 27352451 (-)
LOC103032591 itcha,LOC108431834,LOC108271999,LOC107681287,LOC107666068 coding upstream 478641 27358188 ~ 27385149 (-)
G113942 NA non-coding downstream 128046 26688729 ~ 26689126 (-)
LOC111193690 NA non-coding downstream 180870 26633723 ~ 26636302 (-)
G113917 NA non-coding downstream 183945 26632977 ~ 26633227 (-)
G113912 NA non-coding downstream 187412 26629483 ~ 26629760 (-)
G113915 NA non-coding downstream 200968 26615936 ~ 26616204 (-)
G113949 NA non-coding upstream 246618 27126165 ~ 27126369 (-)
LOC111193691 NA non-coding upstream 281215 27160762 ~ 27189599 (-)
G113956 NA non-coding upstream 318356 27197903 ~ 27198191 (-)
G113964 NA non-coding upstream 393303 27272850 ~ 27273123 (-)
LOC111193753 NA non-coding upstream 586397 27465944 ~ 27467318 (-)
G113888 NA other downstream 423975 26346140 ~ 26393197 (-)
G113826 NA other downstream 754888 26032895 ~ 26062284 (-)
ctsa NA other downstream 1130595 25635304 ~ 25686577 (-)
tnni1 tnni1,tnni1b,LOC103040607,LOC106582713 other downstream 2800371 24004549 ~ 24016801 (-)
G113304 NA other downstream 2915674 23901123 ~ 23901498 (-)
G114134 kcnq2,LOC107758168,LOC107665991,LOC107558155 other upstream 1245689 28125236 ~ 28129856 (-)
G114270 NA other upstream 1468718 28348265 ~ 28361481 (-)
G114304 NA other upstream 1703846 28583393 ~ 28584959 (-)
ndufa4l2 ndufa4l2,LOC107385343 other upstream 2267889 29147436 ~ 29162803 (-)
LOC103044966 tardbp,LOC108427558,LOC107666995,LOC107713527,LOC107555974 other upstream 2399269 29278816 ~ 29284782 (-)

Expression


Co-expression Network