Gene
RNA
| Item | Value |
|---|---|
| gene id | G64938 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000010 |
| NCBI id | null |
| chromosome length | 12265998 |
| location | 6187005 ~ 6187458 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU73909 | True | 454 | lncRNA | 0.32 | 1 | 6187005 | 6187458 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000010_06107283_06108881 | UGT5E1 | coding | downstream | 78016 | 6105579 ~ 6108989 (-) |
| CI01000010_06083696_06089271 | NA | coding | downstream | 97431 | 6083543 ~ 6089574 (-) |
| CI01000010_05921406_05962819 | NA | coding | downstream | 224186 | 5921124 ~ 5962819 (-) |
| CI01000010_05743309_05757933 | CACNA1E | coding | downstream | 429072 | 5743309 ~ 5757933 (-) |
| CI01000010_05734012_05743267 | CACNA1E | coding | downstream | 443506 | 5733797 ~ 5743499 (-) |
| CI01000010_06253230_06263855 | LONRF1L, LONRF1 | coding | upstream | 64908 | 6252366 ~ 6263855 (-) |
| CI01000010_06456276_06481282 | SLC5A5 | coding | upstream | 268818 | 6456276 ~ 6481427 (-) |
| CI01000010_06504062_06505040 | NA | coding | upstream | 316525 | 6503983 ~ 6505276 (-) |
| CI01000010_06588155_06615737 | ITGB4 | coding | upstream | 399762 | 6587220 ~ 6615737 (-) |
| CI01000010_06625010_06627729 | NA | coding | upstream | 436732 | 6624190 ~ 6627729 (-) |
| G64937 | NA | non-coding | downstream | 51 | 6186690 ~ 6186954 (-) |
| G64936 | NA | non-coding | downstream | 353 | 6186150 ~ 6186652 (-) |
| G64935 | NA | non-coding | downstream | 1311 | 6185470 ~ 6185694 (-) |
| G64934 | NA | non-coding | downstream | 2394 | 6184402 ~ 6184611 (-) |
| G64932 | NA | non-coding | downstream | 4562 | 6182201 ~ 6182443 (-) |
| G64939 | NA | non-coding | upstream | 1881 | 6189339 ~ 6189797 (-) |
| G64941 | NA | non-coding | upstream | 3422 | 6190880 ~ 6191456 (-) |
| G64942 | NA | non-coding | upstream | 4714 | 6192172 ~ 6192381 (-) |
| G64943 | NA | non-coding | upstream | 5161 | 6192619 ~ 6192847 (-) |
| G64944 | NA | non-coding | upstream | 5665 | 6193123 ~ 6193329 (-) |
| G64918 | NA | other | downstream | 90525 | 6093689 ~ 6096480 (-) |
| G64877 | NA | other | downstream | 269994 | 5916257 ~ 5917011 (-) |
| G64564 | NA | other | downstream | 944079 | 5049155 ~ 5242926 (-) |
| CI01000010_04612793_04613017 | SMIM15 | other | downstream | 1573449 | 4612460 ~ 4613135 (-) |
| G64237 | NA | other | downstream | 1950589 | 4229950 ~ 4236416 (-) |
| G65453 | NA | other | upstream | 1476233 | 7659435 ~ 7672343 (-) |
| CI01000010_07880416_07900104 | NA | other | upstream | 1655178 | 7880375 ~ 7900104 (-) |
| G67099 | NA | other | upstream | 2454232 | 8641690 ~ 8674897 (-) |
| CI01000010_11929215_11933223 | DYNLL6, DYNLL1, DYNLL2A, DYNLL2, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L | other | upstream | 5741503 | 11928448 ~ 11933343 (-) |
| CI01000010_11965317_11969111 | NA | other | upstream | 5777407 | 11964865 ~ 11969710 (-) |
