G3736


Basic Information

Item Value
gene id G3736
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 14961173 ~ 14963583 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU4998
ctcgcggcaagcggtacctcggcagaaaacgcatgacgtgaactcacgcgactagagagaaactgtagtccaaacaacaataaacgtgCGCGAGAGACTAATAATAGCGATTAGTGAATCCCCTCAGCTGTACATCACTTCCCtacactcatatagagataacaggaggaagagaagaatcagagctttgttctgaggctgagaaacatatacagatccacagaggctgtagagactcaaaactacaaaacaccgcTCACAGAGGTGATGGGTTTTAGAAAACTCCGCCTATTATCAGCAGGAGACGCTTGGCGTCAGCAGCAGCGCAACGCACCCGCAACTGACCAGCGTAGAGCAGAGCGGCAGCACAGCGGAATGCCGCGCGGCATACCGCGTTCAGTGTGCAAGCACCTTaacggtgaatttacactgctccgacgcgacaacgcacagcgacggatcccattcattttcaatgggaagcgccgcctccgtcagacgcagtcgcgcggtgcatcatgggtccgacgcgtcgagagcgggggatgcgatgcgatgaaaagttgagccgagctgaactttatgcaaatgagtccgtccaacgcaatgcgtctatccaatcagagagcaggtgttggcctgtaacgcgtcctcagcgcagcgcatgaaaacattttagttccgctttcaagcgttcagagaagcctggaagagaagtttcaggcttccctgttctttataaaatccctgctgattcacagggactctgtcagcgaggagaaaggctgctgtgattgttggagtctctggtgggtttttaaaatattaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4998 True 829 TUCP 0.51 2 14961173 14963583

Neighbor

gene id symbol gene type direction distance location
wsb1 wsb1,LOC107756317,LOC107587373,LOC107682796,LOC107746651 coding upstream 5829 14940680 ~ 14955344 (+)
LOC103046311 cuedc1,cuedc1b,LOC107672109,LOC107587359,LOC107757269 coding upstream 22339 14906783 ~ 14938834 (+)
LOC103046009 vezf1b,LOC108425912,LOC107756309,LOC107587351,LOC107682824,LOC107672112,LOC108435808 coding upstream 57676 14887299 ~ 14903497 (+)
LOC103045400 zgc:171927,LOC108425914,LOC107672095,LOC107588334,LOC108278279,LOC107683438,LOC107592930,LOC107757416 coding upstream 80541 14875553 ~ 14880632 (+)
LOC103045089 NA coding upstream 85696 14870734 ~ 14875477 (+)
LOC103047124 ksr1 coding downstream 9406 14972989 ~ 15033659 (+)
LOC103021895 NA coding downstream 87891 15051474 ~ 15066217 (+)
akap1 akap1b,akap1 coding downstream 203877 15167460 ~ 15186395 (+)
LOC103023867 msi2b,msi2,LOC108425902,LOC107587484,LOC107682662,LOC108277875,LOC108435815,LOC105028669,LOC106603292 coding downstream 248074 15211657 ~ 15617787 (+)
LOC103029544 NA coding downstream 745897 15709480 ~ 15729311 (+)
G3648 eml2,LOC108277999 non-coding upstream 367114 14592933 ~ 14594059 (+)
G3575 NA non-coding upstream 448384 14511140 ~ 14512789 (+)
G3537 NA non-coding upstream 489421 14312208 ~ 14471752 (+)
G3787 NA non-coding downstream 71183 15034766 ~ 15035187 (+)
G3788 NA non-coding downstream 72359 15035942 ~ 15036582 (+)
trnae-uuc_1 NA non-coding downstream 82730 15046313 ~ 15046384 (+)
G3794 NA non-coding downstream 105847 15069430 ~ 15069802 (+)
G3800 NA non-coding downstream 157151 15120734 ~ 15134707 (+)
LOC107197063 capns1,LOC108425806,LOC105901516,LOC107700232,LOC107548486 other upstream 115547 14840293 ~ 14845626 (+)
LOC103039352 nova2,LOC103039352,LOC108440380,LOC108277822,LOC107669728,LOC107589717,LOC107756760,LOC107379798 other upstream 456158 14444558 ~ 14505015 (+)
LOC103035587 NA other upstream 716793 14217807 ~ 14244380 (+)
G3313 sept5b,LOC108425237 other upstream 1976904 12982625 ~ 12984269 (+)
G3096 NA other upstream 3033923 11924450 ~ 11927250 (+)
G3790 NA other downstream 74972 15038555 ~ 15038914 (+)
LOC103023550 nf1 other downstream 109257 15072840 ~ 15162956 (+)
LOC103040601 NA other downstream 818055 15781638 ~ 15826103 (+)
G4221 NA other downstream 1579359 16542942 ~ 16545854 (+)
G4219 ckm,ckmb,ckma,LOC107690449,LOC107683830,LOC107601735,LOC107743697,LOC107718278 other downstream 1655463 16619046 ~ 16623069 (+)

Expression


Co-expression Network