G4221


Basic Information

Item Value
gene id G4221
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 16542942 ~ 16545854 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU5723
CTGTGTTCATCAATACAATTCATACTCCTGTTTTCTAAATACTACAAGAAAAATCACACGTCTAAGAATATATGCACTAACATTTTCTGTAATTCATGCACTATGTGACATCTGCCTGGCACATCAAACACTCTCACTCATCAATTTAAAACGAAATAAAAACATAGGTGCTGTATTATGTGTAAAGGCCTATTCTGAAGAAGAGAAGCAATGCGCTACAGCACTGAGCAAACACAAATCACGGCTGCAGCAGAGCAACCTCACAACACATAAGCATTCAAGATAGAGATTATAATAATTGTTAGAATTTGCATTTGTGGCGTACATATAAAGAAACAGGCAACGCTGCCACAGCGCAGAGGTGACAAGAAAGACTTCTTGAGGTCTCGATTAGCAAGGCATCCAGAGGTGGCCGAGCATTTTGGGTTATCCTTCACCAAATGGATATTCTTACTGATCCATCTTCTCACATACATGCTAGACACATTGAAACAGTCCCACGGGTTTTCACTGAGATATATGGCTCTCAGGGATGTCAAAGCCTCAAAAGTCCCGTTACTAAGTGATCGCAGTCTGTTGGATTTGAGATGTAGTTGTTCCAGGTTCTTCAGGCTGTGGAATTGTTTGTTGGCTAGATGGTGGAGGTGGTTATTCTCCAGATCAAGCTGTTTCAAGGAGTTCAGTTTGTAGAACACATTCAGGGGCAGATGGGATAGATAGTTGTTCTGCAGGAAGAGTTTCTGAAGGTTTCCCTGAGAGCTGAATATGCTGTGTGGTAATGCCTTGAGCTTATTGAAACTCAGGTGTATTTCTCTCAGTGTGGTGAGGTGTTTAAAATCCTCAGAGGACAAGGTGTTCAAATTATTGTTTGACAAGTCAAGTGTTCTCAAGTTCGGAAGTGTGAAAAATTCAACTGGGAGGCTTTCTATTCGGTTTCGGTTCAGTGACAGTTCCCGTAGGTCATCAAGACCAGCCAGGAGTTCTTTGTGGAGATCGGAAAGGTGATTATCATTGAGTCTAAGAGCTCTAAGCATCTTAAGGCTTTTGAAGGACAGTTTTGGTATATTGTGGATATGATTATTCGTCAGTTGCAGCTCTTTGAGGTGCCGTGTTGTTTGGAAAAGGTACTTGGGAATTCTGGAAAGAGCATTGTTATTTAAGTAAAGGCTATGCAgatgtttaagatttttaaataaagatgcaTTGAGCTGTAAGATGTTGTTGTTGTCCAATTGTAAATCCCTAAGTTCTGTAAGCGGATTAAATGTTTCTGGGAAGATAACAGAAATATTATTGCTATCTAGCTGCAACACTTTTAATTGGGTTAAATTGTTGAACAGGCGTTCAGGAATTGTGTCCAGTTCATTGTTGTACAAATTAAGGTTCTTAAGTTTACCTAGGTCCTGAAAGACACATGAGGGTAGATCTTGCAACTGGTTGAAACTTAAGTCTAGTTCAGCAAGCATGAAGAGACCCCTCAAAGAATCTTCATCTAGGATTTCAAGGGGATTGTTGCTCAAGTCCAGTTTCTTCAGGCCAGCTAGCCCAGAGAATGCATTTTCAGGAACAGAGCTGATAGCGTTTTTCTGCAAGAAAAGGCGGTTGAGGCGGGGTATCTCCTTAAAGGCTTCCGTGGGTACAGCTGTGAGCATATTTTTACTGAGATCAAGGTGAGCTAGTTTCCGTGTACCCTTGAAAAGGCCACTAGAAATGTTTGTCAGTTGGTTATTGCTAAGATCGATGTGAACTAGCCTTCTCAGTGTTCTAAATGTTGATGAATTCAGCTCTGAGATTAAATTACTGTCCATATGTAGATGCTTAAGCTTTGAAAGTGGATGAAATAGATCTGGTGGGATGATATGAATCTTGTTTTTGTCAAGCTGCAGTTCTTGCAACAAGGTTAAATTGTTGAACAGGCCTTGAGGGAGGGATGTCAAGGCAATGTCGAATAGACAGAGGTGCTTTAGTTTGCCTACGTCTTGAAACACTGATGGTGGTAAAACCTGCAATTTACTGGAGCTCAAATCTAAATCATGAAGCTTACGAAGACCTCGTAAGGCGGCCGCATGTATAACTTTAAGAGGGTTGTTGTTCAGATTCAACATTTGTAATGAAGACAGGCTGTAGAAAGCATTTTCCGGAACACGGGTGATCCCATTTTGATGTAGATAGAGGCTGGTGAGATTGGGGGTATCTTTGAGGGTGCCAGTGGGCACAGTGCTGAGCCTGTTTTTACTGAGATCCAGATGACGCAGGCCATGTAGGCCTAGGAAGGTCCCTTCCTCTACACTGCTCAAGTTGTTGTTGGACAGGACGAGTTTGTTTAGATATGTGCAGTTCTCAAAAACACCCTTTTCTATTATCTTTATATGATTCTTGTTCAGGTGGATCTCCTCAAGATCAGATCCTCCCTCAAATGCACCATATGAAAGGCTGAGTATCTCATTCAAGCTCAAAACGAGGATCTTAAGGTTGGTCAAACCTTGAAGGAACTTCTGAGGAAGAATCTTAATGTTGTTTTCACTGAGATCTAATAGGGTGAGATTAGTCAGTTCCTGAAATTTTCCAGTTTTCAAACTGCTAATTCCATTTCCTCTTAAAAACAGTTCTGTAAGGCTACTCATATTTGGTAAGGTGGTGGTACCAGTGAGCCATTCACTGAGCCGGTTGTTGGTGAGATCAAGGACCAGAAGTTCCTCCAGACCTTCTCTGGGTAGAGCTCGGATCAAGTTGTGGGTCACATAGAGGTTCTTTGTGCCTGGTGGAAGTTGAGGAAACTCCAAAAGGTTCTTGTTTGAGCAAGTGATGATGGTCGCATTGTCCACACACTTGCATGACTTAATACAagctccagctgctgctgtgaGGGTCATTACCACACTCAGAAGCCCAAGCATGGTTCCACACTTTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5723 True 2913 TUCP 0.42 1 16542942 16545854

Neighbor

gene id symbol gene type direction distance location
LOC107197545 NA coding upstream 499 16538471 ~ 16542443 (+)
LOC103030966 NA coding upstream 6419 16531349 ~ 16536523 (+)
exoc3l2 exoc3l2,exoc3l2b,LOC107729130,LOC107597542 coding upstream 12700 16482196 ~ 16530242 (+)
LOC103047564 ppp1r14a,ppp1r14ab,LOC103047564,LOC108425826,LOC107729097,LOC107586311,LOC107597604,LOC107662758 coding upstream 65837 16454684 ~ 16477105 (+)
LOC103022964 LOC103022964 coding upstream 250822 16280969 ~ 16292120 (+)
mark4 mark4,si:dkey-31m14.7,LOC107585548 coding downstream 15632 16561486 ~ 16617930 (+)
LOC103044410 klc3,LOC108425834,LOC107601696,LOC107743695 coding downstream 87469 16633323 ~ 16643820 (+)
LOC111192859 sae1,LOC107718284 coding downstream 143380 16689234 ~ 16691759 (+)
lsamp lsamp coding downstream 908496 17454350 ~ 17873816 (+)
LOC111192370 NA coding downstream 1471905 18017759 ~ 18022389 (+)
G4214 NA non-coding upstream 62290 16480335 ~ 16480652 (+)
LOC111192355 NA non-coding upstream 176253 16356282 ~ 16366689 (+)
LOC111192356 NA non-coding upstream 192391 16349607 ~ 16350551 (+)
G4167 NA non-coding upstream 228005 16314112 ~ 16314937 (+)
G4164 NA non-coding upstream 230273 16311941 ~ 16312669 (+)
G4277 NA non-coding downstream 133551 16679405 ~ 16681219 (+)
G4331 NA non-coding downstream 599067 17144921 ~ 17145205 (+)
G4334 NA non-coding downstream 608906 17154760 ~ 17155096 (+)
G4337 NA non-coding downstream 611790 17157644 ~ 17157851 (+)
G4346 NA non-coding downstream 643178 17189032 ~ 17189246 (+)
LOC103040601 NA other upstream 716839 15781638 ~ 15826103 (+)
LOC103023550 nf1 other upstream 1379986 15072840 ~ 15162956 (+)
G3790 NA other upstream 1504028 15038555 ~ 15038914 (+)
G3736 NA other upstream 1579359 14961173 ~ 14963583 (+)
LOC107197063 capns1,LOC108425806,LOC105901516,LOC107700232,LOC107548486 other upstream 1697316 14840293 ~ 14845626 (+)
G4219 ckm,ckmb,ckma,LOC107690449,LOC107683830,LOC107601735,LOC107743697,LOC107718278 other downstream 73192 16619046 ~ 16623069 (+)
LOC103039709 NA other downstream 1464324 18010178 ~ 18012103 (+)
LOC103034503 efhd1,LOC103034503,LOC107669899,LOC107741634,LOC107585735,LOC107564379 other downstream 1495435 18041289 ~ 18422356 (+)
G4550 sik3 other downstream 1526110 18071964 ~ 18073663 (+)
G4612 NA other downstream 2213521 18759375 ~ 18759858 (+)

Expression


Co-expression Network