exoc3l2 (exoc3l2,exoc3l2b,LOC107729130,LOC107597542)


Basic Information

Item Value
gene id exoc3l2
gene name exoc3l2,exoc3l2b,LOC107729130,LOC107597542
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 16482196 ~ 16530242 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245973.3
AATAAAAGTGCGGTGAGGCGCTGAGCGGAGCGCCGTGCGGTTTTGCGCAACAGCTTCACTCAGGGATTTATTTCCAGACAGAAAATCTGAACAGAAGAATTTCACACAGGAGCTCCGGCGCTTTATATCCGCGGAGTGCAGTTTCTCAGGTCTCGGCTGTGTGTCTGCACCTCTGTCAGAATGGGCCGCCGTTTATCTTCCAGGCAGAAACATGCCCATCCTTAAGAACCTCCCAGCTCGCCTGAAGGGGGGCAAGGTGAATGTGGATTTGGAGAACACGCACAGCGAGCTGATTCTCCGCAAGATGAGCCTCAACCACAACCCATTTGGCACAGAAAACGGCTCAGACGAGGATTGGCCCAGGGACAGCGGGGGCTCACTGCTGGATGGAAGAGCTCCCCGGGACCGCAACCCGTTCGAGGATGAGGAGGACGAGAACGAGGCCAACGAGGAGAGGCGTGGAGGCTCCGGAAAGGGCAGTTCCCTCAAAGGGACACTGGACCGCATCCGAGGAGTGTCCCCACTCAAGACCCTGGGCAAGCTGGGCAAGGGTCTGCGCATGTCAGGAAGGAGTAAAGGCAGTGCCACCCCTTCTCCACAGGGCTCCATCGGCATGCCCTCACccatggagagaaagaaaaagggcaGAAGGAGTTCAGACGGAAGCCTCCTGAGAATGGCAGGCAAGTGTCGAGAGAACAGCCGTAAAGAAAGCTTGCCCAATGGAGACCTGTGTTCAGAGAGTGACGCCGACTCTACCAGCCGCAGACTCTCGTTTTTGAAGATCGTGGGCCGAGGCAAGCAGAAGAGGGAGTCCATGGTGGACCGCTCAGCATCGCCCGGACCTGAGGAGGAGCCGGTGGAGGAGGTACCAGAGGTCAAACCCAGGGAGCCTCTATCAGTGTTGGAGATTCTTCAGCTAGTGACCAAGAGAGACTTGTTCCTGGCAGACACCCACATCCTGGAGCTGGAACAGGAGTGTATGGAGATGTCCTCTTCACCAGCAGGAGGCAACATCCCTGAGGATCTGAACAGCCCCACCAAAGACAGCAGCCGCCGCAAGGCCAAAGACGTGGAGCTGCTGTACGAGGCGCTGCAGAAGGAGCTGTGGGATGTGGTCCGGGAGTCCTTGCGCTCTCCAACAGCTGGACCCAACCTGGGCCTGGTGGTGCAGGTCCTGCAGCAGGAGGAGCAGGTCGACCGGGACTGGGCACTGAGCGAGGGGGCCGATCAGGGAGGGCCTCGGCCCAGGGAGCTGAAGAAGCGCTGGAAGGAGGCTGTGACTGAGGCTGCTGATGCCAATCTGCCCCAGCATGCAGACATCCAGGCAGGAGAGCTGGCAGCCTACCTGGACAAGCTGAGGAGCCACATGGTGGAGGACCTGGGGGCCGCACGCAGGAACGTGGTGTCTGTGTACCCTATGGAGTACGATGCCTTTCAGGTGTACGTTCAGAGCTACCACCAGGCCGTCACCCGCCGCCTGCAGACCATTACCAACACAGAACTGCAGATTACTGACACCTACTCTCTTCTAGACTGGATCTACAACATTTACAACAGGGATGTCCTTGGAACAGTGAGCATAACATCGCCCATCAACCGCTCTCAGCTAGACCCGCTGCTGCCCACGGAGACGGTGGACAAGCTGGAGCTGGACTGCCTCAATTCAGTCAGGGGGAAAGTAACCAATGAGCTGTCTCAGGTTTTGGAcgaggaagagaagagatggatggagacGCTGCACGTTGAGGAATATCAGATCTTACTGGCCCGCACGGTTATTCAGAGGCTGCAGGACGATCTAGAAAGATCAGCAGCAGTAAACCGGAATCTGGGTTCGCGAGTTGCCCAGTGCAGCCTTAATGGACTTGCCGATTTCTTGTACAGCTTTCAGAGAAAGGTGGAAATGTTCCACGAAGGCCTCGTGAGTCAGTCTGGGGAAAATGAAGATGGTTACATTGCCAAAACCATCGCTTTGGCCAACTGCTGCCCCCCCTTCAGGGGATTTGTGGAGCGCTGTGTACAGTGTGACCCTGCTGTTAGCGAAGATTCCAGCCGCAGAGCCAACACTGCCCTGGACAGGATCGTAAACCTGAGTGTGAGAGTGCTGAACGACAGGCTGTTCGAGCACATCAGGCCTTTCTTTGACAAGCTGGTGAAGAGGAAATGGCTGAGCAACACAGAAGCCTTTGAGAGCATCATGTCCTACATTAAGGAGCACTTCAAGAAGTTCCGGAGGATGGACAGCCCACCGTACCAGGTCTTGGTGGCAGAAGTCCATCGGCGAGTGATGACCGAATACGTTCGGGCTATTATGAGAGGCAGAATCATCTGTACATCACTCAAGATGAGGAAGAGGATGGCAGGCCGCCTCCGCGAGGAGGGCAAACTCCTCAAAACACTCTTCAAAGACTTAGAGTCTTCTGCCTCTTGGTTAGACAGCGCCATTTCCCACATATCCGAGATTATCCTGCTAGAAGACACACCTTCCATCCAAATCGAGGTCGGAGTCCTAGTTCGGGAATTCCCTGATGTACGGAAGAAGCATGTGTCTGCCATCCTGAACATCCGAGGCATGACTCGGCAGATGGAGAGGCAGGAGATCCTGAACATTGTGAAGGACATTGAGAACAGCGACAGTCTCTCACGGCTGTCCCGAGATCGCGCTCTATTCGCTGACGTACCGGTAACGTCAGAAGTGCATTGCCTGAACGTGGGCCTGAGTCGCATTGCCCTGACCGCTTCATCCTGCTTCTCTGGCCTGAGAAGAAACCGCAGGAGAACTCCTGCCAGAGAGATCCAGGACGAAATGctgtaaaagaatgtaatgcATTGCAGCAGATTTTCTGACTCTGTAATAAACCATGAGGACTGTCAGCAGACTCAGTGTTTAGAGCGAAAACCAGCTGCATCATTTGTCAAGCCATACGTGAGGACTTCTTGCTGATGTTAACATTTCAATGTCTTAACTGAGAAAAAGGCACCAGCTTGCGCTGTAAGACTGATTCTGAATGGTGAACATTTGAAAAACGTGTGTgtgaaatgttaaatgtttcatTTCTATTAGCTTATATTAGTATTGGGATCAACAATGTACTTAGGCCTGTATTACAATTCAGAACTACTGATACAAACCATCACTCGGTTTAAAtccaaaaatgaataaataagtagATATATCTGAATGAATAGGAGGAACCATTTCCCACATTGGCCGTAATGCAATACTGATGGGACtgaatttatgttttatttttaattgtatatgATGATTTAATACTTGATCTAAGGTACTATGCAATGATCTATGATCtctgttattatttttctcATATTTAAATGAGCAATTTCATGCTGCAGTCGTCTTGTAGTATCATGTAacatgttttgcaatactgatGATATTATTCACGTCTGTctgtggaaaaataaaatcaaggGCTACTATTTATGTACCAGATGCAGGATAGACTTTATTTATTGCACCACAATTTGTCACATTTCTGTGATACTCAGTAGCACAACAGCAAAATATCCACATACTTCATTTACAGTACAAACACATGCATTTAATACTATTCCTGCTCAAGTTAATGGACCAAAATGTTTAGACAGGAGAATTTTGGGATAGCACTTTTCTCtcacaaatgttttattttctaaatcccaaatgtcttttattttatgctgCCGTTGGAGCTGTGTGTAACTATATTGATATTACACTACTTCAGTCAGTTTATCTGTAGTTTCTGACTGCTCTGCTTATGTTAATGTGGGAGTCACACTTAAAAAGACATCCAAGATTTATCTTCTCAATGGGCTTTAGGGTACTCTGTATATTTAAAGGATTTAAGAGAAGTCTTTTCTTCAGAATTATCTCTGCTTTTGGAAATAGAATCCCCCCTATACATTTGTTAaatcatataataataaatgagaaaGATGCTAAAA
>XM_007245974.3
TCCAGACGCGCCTTTGGCTGGGACAGGCTCACTCGATTATTCAGTCGCTCTCGTTTTTACCTCAACATACGGTAAAAACGAGGAATGTCCCAGCACTGAGAATACAAGGGACTTACCACTGAAGAGCTGATAAACAAGCGTTTATCTTCCAGGCAGAAACATGCCCATCCTTAAGAACCTCCCAGCTCGCCTGAAGGGGGGCAAGGTGAATGTGGATTTGGAGAACACGCACAGCGAGCTGATTCTCCGCAAGATGAGCCTCAACCACAACCCATTTGGCACAGAAAACGGCTCAGACGAGGATTGGCCCAGGGACAGCGGGGGCTCACTGCTGGATGGAAGAGCTCCCCGGGACCGCAACCCGTTCGAGGATGAGGAGGACGAGAACGAGGCCAACGAGGAGAGGCGTGGAGGCTCCGGAAAGGGCAGTTCCCTCAAAGGGACACTGGACCGCATCCGAGGAGTGTCCCCACTCAAGACCCTGGGCAAGCTGGGCAAGGGTCTGCGCATGTCAGGAAGGAGTAAAGGCAGTGCCACCCCTTCTCCACAGGGCTCCATCGGCATGCCCTCACccatggagagaaagaaaaagggcaGAAGGAGTTCAGACGGAAGCCTCCTGAGAATGGCAGGCAAGTGTCGAGAGAACAGCCGTAAAGAAAGCTTGCCCAATGGAGACCTGTGTTCAGAGAGTGACGCCGACTCTACCAGCCGCAGACTCTCGTTTTTGAAGATCGTGGGCCGAGGCAAGCAGAAGAGGGAGTCCATGGTGGACCGCTCAGCATCGCCCGGACCTGAGGAGGAGCCGGTGGAGGAGGTACCAGAGGTCAAACCCAGGGAGCCTCTATCAGTGTTGGAGATTCTTCAGCTAGTGACCAAGAGAGACTTGTTCCTGGCAGACACCCACATCCTGGAGCTGGAACAGGAGTGTATGGAGATGTCCTCTTCACCAGCAGGAGGCAACATCCCTGAGGATCTGAACAGCCCCACCAAAGACAGCAGCCGCCGCAAGGCCAAAGACGTGGAGCTGCTGTACGAGGCGCTGCAGAAGGAGCTGTGGGATGTGGTCCGGGAGTCCTTGCGCTCTCCAACAGCTGGACCCAACCTGGGCCTGGTGGTGCAGGTCCTGCAGCAGGAGGAGCAGGTCGACCGGGACTGGGCACTGAGCGAGGGGGCCGATCAGGGAGGGCCTCGGCCCAGGGAGCTGAAGAAGCGCTGGAAGGAGGCTGTGACTGAGGCTGCTGATGCCAATCTGCCCCAGCATGCAGACATCCAGGCAGGAGAGCTGGCAGCCTACCTGGACAAGCTGAGGAGCCACATGGTGGAGGACCTGGGGGCCGCACGCAGGAACGTGGTGTCTGTGTACCCTATGGAGTACGATGCCTTTCAGGTGTACGTTCAGAGCTACCACCAGGCCGTCACCCGCCGCCTGCAGACCATTACCAACACAGAACTGCAGATTACTGACACCTACTCTCTTCTAGACTGGATCTACAACATTTACAACAGGGATGTCCTTGGAACAGTGAGCATAACATCGCCCATCAACCGCTCTCAGCTAGACCCGCTGCTGCCCACGGAGACGGTGGACAAGCTGGAGCTGGACTGCCTCAATTCAGTCAGGGGGAAAGTAACCAATGAGCTGTCTCAGGTTTTGGAcgaggaagagaagagatggatggagacGCTGCACGTTGAGGAATATCAGATCTTACTGGCCCGCACGGTTATTCAGAGGCTGCAGGACGATCTAGAAAGATCAGCAGCAGTAAACCGGAATCTGGGTTCGCGAGTTGCCCAGTGCAGCCTTAATGGACTTGCCGATTTCTTGTACAGCTTTCAGAGAAAGGTGGAAATGTTCCACGAAGGCCTCGTGAGTCAGTCTGGGGAAAATGAAGATGGTTACATTGCCAAAACCATCGCTTTGGCCAACTGCTGCCCCCCCTTCAGGGGATTTGTGGAGCGCTGTGTACAGTGTGACCCTGCTGTTAGCGAAGATTCCAGCCGCAGAGCCAACACTGCCCTGGACAGGATCGTAAACCTGAGTGTGAGAGTGCTGAACGACAGGCTGTTCGAGCACATCAGGCCTTTCTTTGACAAGCTGGTGAAGAGGAAATGGCTGAGCAACACAGAAGCCTTTGAGAGCATCATGTCCTACATTAAGGAGCACTTCAAGAAGTTCCGGAGGATGGACAGCCCACCGTACCAGGTCTTGGTGGCAGAAGTCCATCGGCGAGTGATGACCGAATACGTTCGGGCTATTATGAGAGGCAGAATCATCTGTACATCACTCAAGATGAGGAAGAGGATGGCAGGCCGCCTCCGCGAGGAGGGCAAACTCCTCAAAACACTCTTCAAAGACTTAGAGTCTTCTGCCTCTTGGTTAGACAGCGCCATTTCCCACATATCCGAGATTATCCTGCTAGAAGACACACCTTCCATCCAAATCGAGGTCGGAGTCCTAGTTCGGGAATTCCCTGATGTACGGAAGAAGCATGTGTCTGCCATCCTGAACATCCGAGGCATGACTCGGCAGATGGAGAGGCAGGAGATCCTGAACATTGTGAAGGACATTGAGAACAGCGACAGTCTCTCACGGCTGTCCCGAGATCGCGCTCTATTCGCTGACGTACCGGTAACGTCAGAAGTGCATTGCCTGAACGTGGGCCTGAGTCGCATTGCCCTGACCGCTTCATCCTGCTTCTCTGGCCTGAGAAGAAACCGCAGGAGAACTCCTGCCAGAGAGATCCAGGACGAAATGctgtaaaagaatgtaatgcATTGCAGCAGATTTTCTGACTCTGTAATAAACCATGAGGACTGTCAGCAGACTCAGTGTTTAGAGCGAAAACCAGCTGCATCATTTGTCAAGCCATACGTGAGGACTTCTTGCTGATGTTAACATTTCAATGTCTTAACTGAGAAAAAGGCACCAGCTTGCGCTGTAAGACTGATTCTGAATGGTGAACATTTGAAAAACGTGTGTgtgaaatgttaaatgtttcatTTCTATTAGCTTATATTAGTATTGGGATCAACAATGTACTTAGGCCTGTATTACAATTCAGAACTACTGATACAAACCATCACTCGGTTTAAAtccaaaaatgaataaataagtagATATATCTGAATGAATAGGAGGAACCATTTCCCACATTGGCCGTAATGCAATACTGATGGGACtgaatttatgttttatttttaattgtatatgATGATTTAATACTTGATCTAAGGTACTATGCAATGATCTATGATCtctgttattatttttctcATATTTAAATGAGCAATTTCATGCTGCAGTCGTCTTGTAGTATCATGTAacatgttttgcaatactgatGATATTATTCACGTCTGTctgtggaaaaataaaatcaaggGCTACTATTTATGTACCAGATGCAGGATAGACTTTATTTATTGCACCACAATTTGTCACATTTCTGTGATACTCAGTAGCACAACAGCAAAATATCCACATACTTCATTTACAGTACAAACACATGCATTTAATACTATTCCTGCTCAAGTTAATGGACCAAAATGTTTAGACAGGAGAATTTTGGGATAGCACTTTTCTCtcacaaatgttttattttctaaatcccaaatgtcttttattttatgctgCCGTTGGAGCTGTGTGTAACTATATTGATATTACACTACTTCAGTCAGTTTATCTGTAGTTTCTGACTGCTCTGCTTATGTTAATGTGGGAGTCACACTTAAAAAGACATCCAAGATTTATCTTCTCAATGGGCTTTAGGGTACTCTGTATATTTAAAGGATTTAAGAGAAGTCTTTTCTTCAGAATTATCTCTGCTTTTGGAAATAGAATCCCCCCTATACATTTGTTAaatcatataataataaatgagaaaGATGCTAAAA

Function

symbol description
exoc3l2b Predicted to enable SNARE binding activity. Predicted to be involved in exocyst localization and exocytosis. Predicted to be part of exocyst. Is expressed in hindbrain; neural crest; and pharyngeal arch. Orthologous to human EXOC3L2 (exocyst complex component 3 like 2).
exoc3l2 Predicted to enable SNARE binding activity. Predicted to be involved in exocyst localization and exocytosis. Predicted to act upstream of or within in utero embryonic development. Predicted to be part of exocyst.

NR:

description
PREDICTED: exocyst complex component 3-like protein 2

GO: NA

KEGG:

id description
K19988 EXOC3L2; exocyst complex component 3-like protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245973.3 True 3954 mRNA 0.49 13 16491059 16530242
XM_007245974.3 False 3903 mRNA 0.49 13 16482196 16530242

Neighbor

gene id symbol gene type direction distance location
LOC103047564 ppp1r14a,ppp1r14ab,LOC103047564,LOC108425826,LOC107729097,LOC107586311,LOC107597604,LOC107662758 coding upstream 5091 16454684 ~ 16477105 (+)
LOC103022964 LOC103022964 coding upstream 190076 16280969 ~ 16292120 (+)
LOC103022345 chp2,LOC108425820,LOC108277499,LOC107657559,LOC107586310,LOC106580765 coding upstream 205363 16271162 ~ 16276833 (+)
dll3 NA coding upstream 270691 16205897 ~ 16211505 (+)
timm50 timm50,LOC107586258,LOC107729126,LOC107728222,LOC107662791 coding upstream 289628 16159758 ~ 16192568 (+)
LOC103030966 NA coding downstream 1107 16531349 ~ 16536523 (+)
LOC107197545 NA coding downstream 8229 16538471 ~ 16542443 (+)
mark4 mark4,si:dkey-31m14.7,LOC107585548 coding downstream 31244 16561486 ~ 16617930 (+)
LOC103044410 klc3,LOC108425834,LOC107601696,LOC107743695 coding downstream 103081 16633323 ~ 16643820 (+)
LOC111192859 sae1,LOC107718284 coding downstream 158992 16689234 ~ 16691759 (+)
G4214 NA non-coding upstream 1544 16480335 ~ 16480652 (+)
LOC111192355 NA non-coding upstream 115507 16356282 ~ 16366689 (+)
LOC111192356 NA non-coding upstream 131645 16349607 ~ 16350551 (+)
G4167 NA non-coding upstream 167259 16314112 ~ 16314937 (+)
G4164 NA non-coding upstream 169527 16311941 ~ 16312669 (+)
G4277 NA non-coding downstream 149163 16679405 ~ 16681219 (+)
G4331 NA non-coding downstream 614679 17144921 ~ 17145205 (+)
G4334 NA non-coding downstream 624518 17154760 ~ 17155096 (+)
G4337 NA non-coding downstream 627402 17157644 ~ 17157851 (+)
G4346 NA non-coding downstream 658790 17189032 ~ 17189246 (+)
LOC103040601 NA other upstream 656093 15781638 ~ 15826103 (+)
LOC103023550 nf1 other upstream 1319240 15072840 ~ 15162956 (+)
G3790 NA other upstream 1443282 15038555 ~ 15038914 (+)
G3736 NA other upstream 1518613 14961173 ~ 14963583 (+)
LOC107197063 capns1,LOC108425806,LOC105901516,LOC107700232,LOC107548486 other upstream 1636570 14840293 ~ 14845626 (+)
G4221 NA other downstream 12700 16542942 ~ 16545854 (+)
G4219 ckm,ckmb,ckma,LOC107690449,LOC107683830,LOC107601735,LOC107743697,LOC107718278 other downstream 88804 16619046 ~ 16623069 (+)
LOC103039709 NA other downstream 1479936 18010178 ~ 18012103 (+)
LOC103034503 efhd1,LOC103034503,LOC107669899,LOC107741634,LOC107585735,LOC107564379 other downstream 1511047 18041289 ~ 18422356 (+)
G4550 sik3 other downstream 1541722 18071964 ~ 18073663 (+)

Expression


Co-expression Network