G129439


Basic Information

Item Value
gene id G129439
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 5065010 ~ 5078855 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU175087
agagctttcagacctcaaataatgcaaagaaaacaagttcatattcataaagttttaagagttcagaaatcaatatttggtggaataaccctgttttttaatcacagttgtcatgcatcttggcatcatgttctcctccaccagtcttacacactgcttttggataactttatgctgctttactcctggtgcaaaaattcaagcagttcagtttggtttgatggcttgtgatcatccatcttcctcttgattatattccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175087 True 261 lncRNA 0.36 2 5065010 5078855

Neighbor

gene id symbol gene type direction distance location
LOC103038301 fignl2 coding downstream 41220 4989760 ~ 5023790 (-)
LOC103043059 LOC108433165 coding downstream 91039 4909232 ~ 4973971 (-)
dtx3 dtx3,LOC107695821,LOC107745454,LOC107571783,LOC107716192 coding downstream 179126 4873143 ~ 4885884 (-)
LOC103042747 adcy6b,LOC108433131,LOC108276068,LOC107716189,LOC107745452,LOC107695824,LOC107668560 coding downstream 344357 4632842 ~ 4720653 (-)
LOC103036111 tbx18 coding downstream 506872 4546351 ~ 4558138 (-)
LOC103039653 scn8aa,LOC108433193,LOC100304804 coding upstream 43144 5121999 ~ 5224651 (-)
LOC103043672 dip2ba,LOC108433219,LOC107745461,LOC107687534,LOC108275871 coding upstream 164163 5243018 ~ 5340493 (-)
atf7 atf7,LOC107563644,LOC107716199,LOC107695816 coding upstream 272751 5351606 ~ 5410774 (-)
asb8 asb8,LOC107745463,LOC107681993,LOC107570421,LOC103141183,LOC107563629 coding upstream 337998 5416853 ~ 5425221 (-)
larp4 LOC108432190 coding upstream 351832 5430687 ~ 5455216 (-)
G129432 NA non-coding downstream 79795 4985010 ~ 4985215 (-)
LOC111194056 NA non-coding downstream 161605 4744420 ~ 4903405 (-)
G129405 rnd1,rnd1b,LOC103037018,LOC107571475,LOC107695736,LOC107577993,LOC107745453,LOC107668562 non-coding downstream 230768 4830329 ~ 4834242 (-)
G129393 NA non-coding downstream 364356 4700334 ~ 4700654 (-)
G129369 NA non-coding downstream 622666 4441955 ~ 4442344 (-)
G129451 NA non-coding upstream 30776 5109631 ~ 5110037 (-)
G129503 NA non-coding upstream 149190 5228045 ~ 5228792 (-)
G129574 NA non-coding upstream 265925 5344780 ~ 5350103 (-)
G129581 NA non-coding upstream 348497 5427352 ~ 5461752 (-)
G129738 NA non-coding upstream 601955 5680810 ~ 5682002 (-)
G129376 NA other downstream 471246 4553615 ~ 4593764 (-)
G129260 hbs1l,LOC107756395,LOC107701737,LOC107723734 other downstream 1169594 3864883 ~ 3895416 (-)
LOC103029128 LOC108432343 other downstream 1362035 3665611 ~ 3702975 (-)
LOC103031137 LOC107572773 other downstream 1476095 3569978 ~ 3588915 (-)
G129147 rnf41,LOC107701697,LOC107756409,LOC107723732,LOC107671855 other downstream 1811839 3250508 ~ 3253171 (-)
G129514 NA other upstream 243841 5322696 ~ 5328697 (-)
G129723 rps26l,LOC103039794,LOC108433306,LOC107563646 other upstream 520418 5599273 ~ 5601455 (-)
LOC103042879 LOC108275853,LOC108433379,LOC107716207,LOC107695803,LOC107708859,LOC107570552,LOC107563637 other upstream 665138 5743993 ~ 5784566 (-)
LOC103044130 tac3 other upstream 1115819 6194674 ~ 6201901 (-)
LOC111194060 pex14,LOC107681981,LOC107708844,LOC107716227,LOC107586529,LOC107695784 other upstream 1960075 7038930 ~ 7056722 (-)

Expression


Co-expression Network