G129795


Basic Information

Item Value
gene id G129795
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035911.1
NCBI id CM008314.1
chromosome length 35718434
location 6074748 ~ 6111588 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU175531
TCCATCCCTGCCCACAAGAGGGCATTACACCATCAGTAGTGTGGCCAGGGCTAAGCATTAATTTAAGGACTGATtttaaggagaactctggtgtaaaattgacttttgttgtagtaaaacaggataaaaagtacttacatttGATGAATAGAACACCTCctctctcccacagctttctaaGATCCAGAAACTTTAACTGTTTGTCCAGACACACTTCAGACtaggtgacacggggcataatttgccctgataaatagctttttccaccgttatccagctcaaagtagctccaccaTCCAATCCGGAAAGCCTCAGGgcttaaaacgaggcattaataacttaaaaatgcacaaaaagcttaataaaaccactgtttacatcccataatgctagcttctgCTCTGAGCTCCGCCATATTTGTAttgataatgtcatagacatacatatactgtacatagactccgcacagcctgcctcctggcaccgctgtgggagaacagaggtgtgctattcatcaaagatgggtactttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175531 True 532 lncRNA 0.42 2 6074748 6111588

Neighbor

gene id symbol gene type direction distance location
LOC103042779 LOC103042779,LOC108432429,LOC108276147,LOC105897280,LOC103356902,LOC101169109,LOC108235199,LOC107681947,LOC104932563 coding downstream 33949 6037204 ~ 6040799 (-)
LOC103042474 LOC108433401 coding downstream 227891 5826686 ~ 5846857 (-)
LOC103041954 LOC103041954,LOC108433384,LOC108275854 coding downstream 251934 5794805 ~ 5822814 (-)
dnajc22 dnajc22 coding downstream 445787 5619884 ~ 5628961 (-)
ikzf4 ikzf4,si:dkey-166n8.9,LOC107563647 coding downstream 456709 5605924 ~ 5618039 (-)
LOC103043708 NA coding upstream 254 6111842 ~ 6153594 (-)
LOC103043500 znf385a,LOC108433446,LOC107708851,LOC107570601,LOC107681944,LOC107586538 coding upstream 151309 6262897 ~ 6443935 (-)
neurod4 neurod4,LOC107683357 coding upstream 368896 6480484 ~ 6483848 (-)
LOC103045842 LOC108276088,LOC107716093,LOC108432462,LOC107695791,LOC100702077,LOC103385967 coding upstream 418987 6530575 ~ 6548372 (-)
LOC103046146 tmem107,LOC108433473,LOC107571795,LOC107695749,LOC107708779 coding upstream 474550 6586138 ~ 6589354 (-)
G129791 NA non-coding downstream 42914 6030018 ~ 6031834 (-)
G129762 NA non-coding downstream 267834 5806089 ~ 5806914 (-)
G129749 NA non-coding downstream 350124 5724160 ~ 5724624 (-)
G129738 NA non-coding downstream 392746 5680810 ~ 5682002 (-)
G129581 NA non-coding downstream 612996 5427352 ~ 5461752 (-)
G129834 NA non-coding upstream 47680 6159268 ~ 6162299 (-)
G129843 NA non-coding upstream 79530 6191118 ~ 6193521 (-)
G129870 NA non-coding upstream 122721 6234309 ~ 6243550 (-)
G129871 NA non-coding upstream 163123 6274711 ~ 6315974 (-)
G129878 NA non-coding upstream 174183 6285771 ~ 6358716 (-)
LOC103042879 LOC108275853,LOC108433379,LOC107716207,LOC107695803,LOC107708859,LOC107570552,LOC107563637 other downstream 290182 5743993 ~ 5784566 (-)
G129723 rps26l,LOC103039794,LOC108433306,LOC107563646 other downstream 473293 5599273 ~ 5601455 (-)
G129514 NA other downstream 746051 5322696 ~ 5328697 (-)
G129376 NA other downstream 1480984 4553615 ~ 4593764 (-)
G129260 hbs1l,LOC107756395,LOC107701737,LOC107723734 other downstream 2179332 3864883 ~ 3895416 (-)
LOC103044130 tac3 other upstream 83086 6194674 ~ 6201901 (-)
LOC111194060 pex14,LOC107681981,LOC107708844,LOC107716227,LOC107586529,LOC107695784 other upstream 927342 7038930 ~ 7056722 (-)
G130093 NA other upstream 1283351 7394939 ~ 7395791 (-)
ctnnbip1 ctnnbip1 other upstream 1624151 7735739 ~ 7790762 (-)
G130420 vwa5b1,LOC107664114,LOC107599492 other upstream 2425416 8537004 ~ 8537987 (-)

Expression


Co-expression Network