G163358


Basic Information

Item Value
gene id G163358
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 38797158 ~ 38797505 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU221251
gtaggattttcttgatttttatctttttaaagaagaaaaattacagcttgaaactcactgcagcgctgcattgaggtgtaataggaggaatagcggtgctctcgtgtctgtgccggagctcctctgagctcaaaccagactctgtaagttttccgaggcggccgcgaccaacgctcgcgagaactgcgacctgctttccgacctttagttctaacagttctacaaggactactggttcattctttacaaactaacatacagacactctggcagaagctggaaagagaccgaatatgtctgtgaaagccagaaaacgagaaagagaaactaatccgcctgaaagaTTTA

Function

GO:

id name namespace
GO:0030902 hindbrain development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221251 True 348 lncRNA 0.45 1 38797158 38797505

Neighbor

gene id symbol gene type direction distance location
LOC103023582 chst1,LOC108432931 coding downstream 125259 38668713 ~ 38671899 (-)
LOC103042980 LOC108432642,LOC102311314,LOC102789927,LOC106562120,LOC101080058,LOC103046663 coding downstream 820882 37964331 ~ 37976276 (-)
LOC103044212 kpyk,LOC103044212,LOC108432067,LOC107712845,LOC108264538,LOC106587214,LOC107665073,LOC107595343 coding downstream 1354198 37409987 ~ 37442960 (-)
fam214a fam214a coding downstream 2474075 36260915 ~ 36323083 (-)
pigb pigb coding downstream 2614891 36170644 ~ 36182267 (-)
LOC111194821 LOC108411626 coding upstream 27818 38825323 ~ 38835978 (-)
LOC103036953 NA coding upstream 352538 39150043 ~ 39171591 (-)
pstpip1 LOC108435346 coding upstream 394806 39192311 ~ 39234568 (-)
rcn2 rcn2,LOC107690352,LOC107725741,LOC107567882 coding upstream 454416 39251921 ~ 39264714 (-)
LOC107197485 NA coding upstream 547233 39344738 ~ 39387914 (-)
G163357 NA non-coding downstream 1946 38794959 ~ 38795212 (-)
G163329 NA non-coding downstream 28686 38692671 ~ 38768472 (-)
G163328 NA non-coding downstream 65777 38662823 ~ 38731381 (-)
G163303 NA non-coding downstream 141863 38607433 ~ 38655295 (-)
G163266 NA non-coding downstream 203007 38593877 ~ 38594151 (-)
G163363 NA non-coding upstream 12829 38810334 ~ 38810555 (-)
G163366 NA non-coding upstream 17764 38815269 ~ 38815551 (-)
G163374 NA non-coding upstream 39527 38837032 ~ 38839370 (-)
G163397 NA non-coding upstream 101202 38898707 ~ 38944097 (-)
G163417 NA non-coding upstream 221339 39018844 ~ 39019068 (-)
LOC111194721 NA other downstream 772825 37981096 ~ 38024333 (-)
G163230 NA other downstream 917743 37878815 ~ 37879415 (-)
onecut1 onecut1 other downstream 2442457 36339380 ~ 36354701 (-)
c18h15orf65 NA other downstream 2656261 36138903 ~ 36140897 (-)
LOC103026784 thsd7a other downstream 4066086 34400663 ~ 34731072 (-)
G163591 NA other upstream 630343 39427848 ~ 39428541 (-)
G163627 LOC108443054,LOC108263931,LOC108265089 other upstream 693277 39490782 ~ 39493278 (-)
LOC111194826 NA other upstream 1027158 39824663 ~ 39828074 (-)
G163831 NA other upstream 1644856 40442361 ~ 40446071 (-)
LOC103037145 LOC108437874,LOC108260277,LOC107083184,LOC104918338,LOC103373486,LOC100698953 other upstream 1975505 40773010 ~ 40798006 (-)

Expression


Co-expression Network