G163417


Basic Information

Item Value
gene id G163417
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 39018844 ~ 39019068 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU221335
ctggttcttcaacaggctcaggtgcatcatgaacatcacagagagggacattgcgtctggtagcaacattgggcaggacaatacatgcaagtgttatgttgcatgctCCCTGTGGTTCGACTCGCAAATAGTTAAGTCATGCAAAGCGTCTCTGCAGAACACTCGATTGctcgtattgttttgcaataagcagtatcttgttactgcaagaaaaggaGTCATCAA

Function

GO:

id name namespace
GO:0008519 ammonium transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221335 True 225 lncRNA 0.45 1 39018844 39019068

Neighbor

gene id symbol gene type direction distance location
LOC111194821 LOC108411626 coding downstream 182866 38825323 ~ 38835978 (-)
LOC103023582 chst1,LOC108432931 coding downstream 346945 38668713 ~ 38671899 (-)
LOC103042980 LOC108432642,LOC102311314,LOC102789927,LOC106562120,LOC101080058,LOC103046663 coding downstream 1042568 37964331 ~ 37976276 (-)
LOC103044212 kpyk,LOC103044212,LOC108432067,LOC107712845,LOC108264538,LOC106587214,LOC107665073,LOC107595343 coding downstream 1575884 37409987 ~ 37442960 (-)
fam214a fam214a coding downstream 2695761 36260915 ~ 36323083 (-)
LOC103036953 NA coding upstream 130975 39150043 ~ 39171591 (-)
pstpip1 LOC108435346 coding upstream 173243 39192311 ~ 39234568 (-)
rcn2 rcn2,LOC107690352,LOC107725741,LOC107567882 coding upstream 232853 39251921 ~ 39264714 (-)
LOC107197485 NA coding upstream 325670 39344738 ~ 39387914 (-)
LOC103027792 st7,LOC108443055,LOC106573121 coding upstream 373310 39392378 ~ 39425469 (-)
G163397 NA non-coding downstream 74747 38898707 ~ 38944097 (-)
G163374 NA non-coding downstream 179474 38837032 ~ 38839370 (-)
G163366 NA non-coding downstream 203293 38815269 ~ 38815551 (-)
G163363 NA non-coding downstream 208289 38810334 ~ 38810555 (-)
G163358 NA non-coding downstream 221339 38797158 ~ 38797505 (-)
G163427 NA non-coding upstream 17796 39036864 ~ 39042425 (-)
G163428 NA non-coding upstream 21036 39040104 ~ 39075089 (-)
LOC111194739 NA non-coding upstream 82142 39101210 ~ 39101815 (-)
LOC111194740 NA non-coding upstream 91696 39110764 ~ 39114315 (-)
LOC111194741 NA non-coding upstream 100653 39119721 ~ 39122245 (-)
LOC111194721 NA other downstream 994511 37981096 ~ 38024333 (-)
G163230 NA other downstream 1139429 37878815 ~ 37879415 (-)
onecut1 onecut1 other downstream 2664143 36339380 ~ 36354701 (-)
c18h15orf65 NA other downstream 2877947 36138903 ~ 36140897 (-)
LOC103026784 thsd7a other downstream 4287772 34400663 ~ 34731072 (-)
G163591 NA other upstream 408780 39427848 ~ 39428541 (-)
G163627 LOC108443054,LOC108263931,LOC108265089 other upstream 471714 39490782 ~ 39493278 (-)
LOC111194826 NA other upstream 805595 39824663 ~ 39828074 (-)
G163831 NA other upstream 1423293 40442361 ~ 40446071 (-)
LOC103037145 LOC108437874,LOC108260277,LOC107083184,LOC104918338,LOC103373486,LOC100698953 other upstream 1753942 40773010 ~ 40798006 (-)

Expression


Co-expression Network