G187030


Basic Information

Item Value
gene id G187030
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 3731592 ~ 3731860 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU253596
AATAATCATAACTAGAAAAGGTAAAGTTCGTGAAcaaactttaagttggcttggaaaagaacgctaataacgttaaaaagttaaaatggttgctaagcttTTTCCgtctgaagagtgtgaagagtcATTGATATGCTGTTAACTTTTGGCCAAACGCTAAATGCtaaaaacgctgaaatctaaaaacatttggttaaacgctgaaatctaaaaacatttggttaaacgctgaaatctaaaaacgtttgattaaacgctgaaatctaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253596 True 269 lncRNA 0.32 1 3731592 3731860

Neighbor

gene id symbol gene type direction distance location
abhd6 abhd6,abhd6a,LOC107657977,LOC105904082 coding upstream 7517 3708892 ~ 3724075 (+)
LOC107197672 NA coding upstream 33291 3694335 ~ 3698301 (+)
flnb flnb,LOC107657976,LOC107712990 coding upstream 40393 3562169 ~ 3691199 (+)
slmap slmap coding upstream 178878 3475655 ~ 3552714 (+)
LOC103028776 LOC103037296 coding upstream 289174 3437851 ~ 3442418 (+)
LOC103034692 NA coding downstream 7263 3739123 ~ 3741018 (+)
LOC103034153 NA coding downstream 16119 3747979 ~ 3752486 (+)
LOC111195355 NA coding downstream 25595 3757455 ~ 3758688 (+)
LOC103027507 NA coding downstream 51080 3782940 ~ 3784341 (+)
LOC103033843 LOC108431592 coding downstream 56369 3788229 ~ 3789355 (+)
G187015 NA non-coding upstream 52260 3664240 ~ 3679332 (+)
G186984 dennd6a,LOC107680547,LOC102794572,LOC107657973 non-coding upstream 274701 3449388 ~ 3456891 (+)
G186968 NA non-coding upstream 330167 3354711 ~ 3401425 (+)
G186917 NA non-coding upstream 454325 3276987 ~ 3277267 (+)
G186915 NA non-coding upstream 514028 3217221 ~ 3217564 (+)
G187031 NA non-coding downstream 2093 3733953 ~ 3736777 (+)
G187033 NA non-coding downstream 29154 3761014 ~ 3774562 (+)
G187050 aldh4a1 non-coding downstream 80487 3812347 ~ 3814756 (+)
G187053 aldh4a1,LOC106582961,LOC107712945 non-coding downstream 86513 3818373 ~ 3821891 (+)
G187047 NA non-coding downstream 91399 3823259 ~ 3826100 (+)
G186978 rps23,rs23,LOC106566095,LOC106566598 other upstream 336749 3392387 ~ 3394843 (+)
G186880 lmcd1 other upstream 729577 2980497 ~ 3002015 (+)
podxl2 NA other upstream 2636255 606833 ~ 1095337 (+)
cers5 cers5,LOC107698577,LOC107590873,LOC107694004,LOC107718462 other upstream 3193376 510575 ~ 538216 (+)
G186231 NA other upstream 3616505 107396 ~ 115087 (+)
p3h1 NA other downstream 2048031 5779891 ~ 5798979 (+)
LOC103029365 NA other downstream 3345305 7077165 ~ 7098672 (+)
trnaq-uug_4 NA other downstream 3460294 7192154 ~ 7192226 (+)
LOC111195452 NA other downstream 4380143 8112003 ~ 8113242 (+)
agtrap agtrap other downstream 4524936 8256796 ~ 8271712 (+)

Expression


Co-expression Network