G188898


Basic Information

Item Value
gene id G188898
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 10990817 ~ 10991394 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU256039
AGACTCAAAGTCCTGCATCAATCCTCTGGAATCTTTGAACATGGACCACCCAGTTATCCAAGAACTACTAGCCTCAGACAGAGACCTCTACAGCCGGGGATTTTACATTCTCTATTGTTGGGTTCCTGGACATAGTGGCATTGGGGGCAATGAAAAAGCAGACATTTTAGCAAGGGAAGCAAGAAATCAGGACCTTTCTTGGAACTATGTCCCAATTACAGATGCCTACTATCTCGTCGAATTTCACTGTAGAAGAAAATGGCAAGATGAATGGTCCAGCAATCCACAAAATAAACTGTATGAAATATCACCAATCATTAATAGAAAATGCAATATGGACTTCCTTAATAGACAAGAACAGAGAATCATGACTAGGTGCCGAATTGGACATACTGCTCTTACCCACCGTCACCTCCTGGTTGGCGAACGGACTCCAGCCTGCCAGTTCTGTGATACTCCTCTAACAATTAAACATATCTTAGTAGACTGCCCTGCACTTTTAACCACCAGAAAGGACTTTTATAGGGTTACAAACGTGAAAGAACTGTTTGAAACGATTCCACCAGCTAGAATACTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256039 True 578 TUCP 0.42 1 10990817 10991394

Neighbor

gene id symbol gene type direction distance location
LOC111195430 gria2,LOC108411138 coding downstream 130919 10834016 ~ 10859898 (-)
lrrc38 lrrc38,LOC108439497,LOC107685631,LOC108281009,LOC107691331,LOC107555684,LOC107568719 coding downstream 706903 10224975 ~ 10283914 (-)
LOC111195372 LOC108410896,LOC108414677,LOC108416243 coding downstream 887924 10094323 ~ 10102893 (-)
aadacl4 NA coding downstream 969140 9999315 ~ 10021677 (-)
LOC103046340 NA coding downstream 994352 9975733 ~ 9996465 (-)
lrig1 lrig1,LOC107716980,LOC107557776 coding upstream 88729 11080123 ~ 11155745 (-)
suclg2 suclg2,LOC107729402,LOC107753779,LOC107699794 coding upstream 380863 11372257 ~ 11534415 (-)
fam19a4 fam19a4,fam19a4b,LOC107655986,LOC107600333,LOC107729393,LOC107696804,LOC107558879 coding upstream 1066138 12057532 ~ 12115859 (-)
tmf1 tmf1 coding upstream 1190725 12182119 ~ 12207582 (-)
hmces hmces coding upstream 1239022 12230416 ~ 12236146 (-)
G188838 NA non-coding downstream 290937 10699614 ~ 10699880 (-)
G188649 NA non-coding downstream 657525 10333047 ~ 10333292 (-)
G188644 NA non-coding downstream 665819 10324521 ~ 10324998 (-)
G188640 NA non-coding downstream 667134 10323482 ~ 10323683 (-)
G188633 NA non-coding downstream 675245 10315341 ~ 10315572 (-)
G188900 NA non-coding upstream 1701 10993095 ~ 10993340 (-)
G188936 NA non-coding upstream 85184 11076578 ~ 11076888 (-)
G188930 NA non-coding upstream 85856 11077250 ~ 11078201 (-)
G188929 NA non-coding upstream 87063 11078457 ~ 11078571 (-)
G188939 NA non-coding upstream 164506 11155900 ~ 11156311 (-)
LOC111195437 NA other downstream 1034500 9951084 ~ 9956317 (-)
ghrh ghrh,LOC103034597,LOC108438619 other downstream 3571011 7409122 ~ 7419806 (-)
G187946 mybl2,mybl2b other downstream 3599791 7388397 ~ 7391026 (-)
pdrg1 pdrg1 other downstream 3797565 7188616 ~ 7193252 (-)
LOC111195363 snrpe other downstream 4007977 6977651 ~ 6982840 (-)
G189055 NA other upstream 1052519 12043913 ~ 12044293 (-)
eogt eogt,LOC107729408 other upstream 1169148 12160542 ~ 12178610 (-)
mapkapk3 mapkapk3,LOC102784126,LOC107384936,LOC101473327,LOC102305022,LOC102199310,LOC106525176 other upstream 1306655 12298049 ~ 12395532 (-)
LOC111195455 NA other upstream 1621217 12612611 ~ 12714032 (-)
G189335 psma5,LOC107685984 other upstream 1623518 12614912 ~ 12619566 (-)

Expression


Co-expression Network