eogt (eogt,LOC107729408)


Basic Information

Item Value
gene id eogt
gene name eogt,LOC107729408
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 12160542 ~ 12178610 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU256290
CTTATTGAAGACTGAGTGATCATTTTTCTATGAGTTCtatttgttgctgttgttgtaataacattgctctctctctctctctctctctctctttctctctgttcttcaggTATAACTGTCAGGATGAAAGCTGCTACCGTGATCTAGCTCGGCTGAGGGGCGTTCACTACCTGACCTGGCAGAAACCTGAAAAAGTGTTTCCTCAGGATAAGGGGCATCACCCTACTCTCGGGGAGCATCCCAAATTCACCAATTACGCTTTCGACCTGGAGGAGTTCATGCGCTTAGTCATGCTGGCTGCAGATCATGTGATGCACCATCGGGACTGGCGTTCAAAACAGACTCGAGATGAGCTATAGCAGCATggctacacacaccacacacatcccTGCACATCCACACACATCCATATAAACACTACTGCTTACATAAACTCAAAGACGCTACAATTCACTCAAAACACTACAAAAAATACTTAGATGTATGAGTCAGACGATAATGTGGCTGTATTTTCTGAGTGAAAATAAGTTAATATTCTCGCACATTCTGCTGCATAACtactatttacttacttaattttacaaaaaaatccgGCATACACAAAAGCAATTGCTAGAGGTGGGACCAAAAATATTGACATCTCGATGTATTGTACTCTTTTTGTTTGCGATACATTATCAATATATGGCATTAAATATGGATATTTGTGTTTAAACATAGGCTAAAAGCTATAAACTCCTCACGACTCACCCTAAAATTTGACTAGCACCACATGGCGgtgctaattaaataaatagtgtaaacTTGCGGAAGAAATTCGGTGATAAATCCAAACTTCCTGGTATCTGCTTATTTAGGAGTGTGTTATCgtctttagtaacacagattTTGCGAActatcgtagagaattgtcttgcaatatattgagtatcgcagaatcacagtatcatgatatcattGTTATTATGGGCAACATATCATGATAACATCGTATCGTGTGTTACCTGGGATTCCCACTACTAGTAatagcacataaaaaaaaacaatgctttttttttttttacattttttgttaatttcttaaaataattggTAATTGCGGTTCGTCTAAAATGTGCTGAAAATATGTGCTATTAAGAATTACtacttattttaatttggaataacTACTTTTCATACTGTcccaacattttcttttttttttgaagatttatttcatattttctcccattttttctcccaatttagctaggccaattttcccacccattcagctgcgaTTCAGCGGTATATCcaccatcactggtgatgccacaacacaaggagagtaaagactagcacacgcctcctccgagtcagactccgcctcttaatgcagcattgccgagtagcatcacagcgaactcggaggaaagcgcagcgactcggttcggatacatcagctcacagatgcagccttgtgctgatcaacatcaccctaggagtgatgagcaGAGAGagggccatctacccactcagaaagcaaggccaattgtgctctctcaggtttCCGGCATCtgagggcaagctgcatgaccaggattcgagccagcgatctcccgatcgtAGTGGCAGCCAGTTGACTGCTGAATTGGTTGTAGACCAGTCGATACCATTGTGATTCCATTACTACACAGTATATTTTAGTTATCCTTGTTGGATTAAATGAACACTTGATTCATTAGAAGTTcactaccggtcaaaagttttagaacactcatatattttttttaagtaatccAGTACAACAagctgcttttaaaaaaaatttttactgcacttcacctgtaAGACctctctaattcttctcttcactgctgaaactgaaactaaaggctaaagctgtttccatgtgggtcagccagacgtgactcttcctgtagcagttttctccagtttctaagtcttttaaaggtgtagGAGACAGTACTCACctctctctggcttcatctgtaatttctccaAAGAAAAGACTTCTACATTTAATGCTCAGAATATCGTTAACTAAACCTATGCTCGTTGTAGTTAACGATCAATTGTGCAAACTTTCtgtagttcagaattaaaaactTTGTAacttaggctatgttcacattacaagccacattactcaaatccgattttttgctcagatcggatttggttCGGATACGTGATTCTGATTTAGAATAGAAAtctgaatagaaaaaaaaatggatttgagtcacttcagcttgataatgtgaacatagctttACAGTTCCCAACTACGCCAACCTATAGAAAAGTACCGAAAGTATTTTGGCACTTTTTTCCAATGGATTAATTTTATGGAAGCTTAATTAAGGCGTGGATTGAAGTGAAGATATTTAAAGTAttatagttttttgtttttatttttattttatttttaaacactacCATATTTAATAGCACAGACATGCACTACTTGTCCAAAACTCTTTGGACATCTtcttattcagtattttttaggGCAACTTTTCCTCctttgctgcaattacagctttCACTCTTCCACTCTTCTACTCTTCTAGTAGGGACTTACACTAGATATCAAtctgaacattgctgtgaggcaTAATTTGATGGCTTTAAGCCACgtaagagcattagtgaggtcaggtactGATGAGTTCAGTCGTTCTGCCGCTCAGACTCATCCCAaaggtactggatggagctcaatcattccagagaacccaGTTCTGTTGCTCTACAGCCAAGTGCTGTGGTTTCTTAACTCTTTTTTAGGGCTTTTGTAAGCAGAATTCACTAAGCTACGGGTGTCTCGATACTTTTGGATGCATACAATGAAGGATCAGTCATATTTATTTGTCAGAAATGtcataaaaaagtattataGTTTGTACACATGTATTTCTCTTTGTCTAAACCTTGttacactttttttgtaaaacagtataaatagtGTTTATTGGCTGAGTATAGCCAGTACTTTAGGAACACATTCCTCTGTGTTCTGGAATCATAATTAAGCCGTAAATCTGAACGCTCTGAATAAAAATGTCCGCAGAAAATGcagataaatgtaaatgtaattgtaaaaaaCAGTCCAAGAGAACAGGCTGTATATGGTTTTATCTAATGTACATAAAGAACGCCGCTGTTACGGAGTGTACAGCATCTGAATTATTACGTAAAATGTGCTGCATGGTTTTTTTGGAACACTACATTTTCTCACATTTAAGAATGTCACTTTTCAAAGTTCCTATCAGTGTTTTTGACCATTTGTGTGTGAATGTCTGTTTAAAACTtga
>XM_022682378.1
tgtctgtctgtctgtctgtctctgagctgatctcatattcatattcatctCATATCTGTCTTATCTGCTCCTCTGCTTTTCTCTCTGAACAGGTTCTTccacttcttctctctctttctctctctctttttctgtctctgttcTCATGTTCTGGTCTTCAGTGTGAGAACGCTGTTCTGGGCTGCAGGCTgggtgtggaggtgtgtatAGGTGGCTGAGGAGCGTCTGAGCTGTGAGAAGgcggGGTGTGTGGATATGCCGCTGTGGGTTGTGTTGTTGATGGTGTGTATTTGTTGTGTGGTGTTTGATGTGGAGCTCCAGCCGCTGCTGAACTACAGCTCTGTGTCTCTCCCTCGACTACACCTTCCATACTTCCTCCACAACAACCGGCCCCTCGCTAAAGCCTGCAGAGAAGACCCCCTCTGCCCCTTTAAAGATGCTCTCTCTCAGAAGGAGTCTTGTTGGGGTTATGAGAGAAACTGCTCGCCTCAGCACCGGTTCAGCTACCCTGTCTGCACCAGCGTGGACCCAGGATGggCGAGCTCAGTTCAGGCGGCTCAAGAGATCTTCTGGAAGCAGGCCGACTTTGGCtacgtgagagagagactgagcgagATGAAGACCTTGTGCAAgcctttaaattctGGAGAATCTTTTCTGAAGTGCACCAGCCACATGCGGTTTTGTAGAGCCACCAATCTTTACTTGGACCTACGGGAACCTCGCAGGGGTCAAGAGAGATATAAGGAGGATTTCCTGCAGAAGGGGGAGATCGGGGGTCGCTGCAGGTTGAACAGTGCAGCGCTGGAGGCAGAAGGGCAGCACAAGAGCCCCCTGCAGTCCTGGTTTGCGGAGCTGCAGACGTTCACAGAGCTGGACTTCCACCCTATAGATGACAACCACTGTGATCTTATTATAGAGAGACCCACCATCTTCATGAAGTTGGATGCAGGAGTGAACATGTACCATCATTTCTGCGACTTTGCCAACCTGTACATCTCCCAGCACCTCAACAACTCCTTCAGCAGAGACGTCAACATCGTCATGTGGGACACGAGTCTGTTTGGATATGGAGATCTCTTCAGTGAGACCTGGAGAGCCTTCTCACACTACGACATCATACACCTCAAAACCTACGACTCCAAACGGgTGTGTTTCAGGGAcgtgtttttctctctgctcCCGAGGATGAGGTACGGCCTCTTCTACAACACCCCCCTGATTTCAAACTGCCAGAGTGAGGGAATGTTCAGAGCCTTCTCTCAGCATGTCCTTCATCGACTCAACATCGAGCAGGAGGGACCCAAGgacGGACGTATTCGTGTGACTCTGCTGGCTCGGAGTACAGAGTACCGCCGGATATTAAACCAACAAGAGatcatAAATGCTCTGAAGACCGTGGCCTTATTTGAGGTCAAGCTGGTGGATTACAAGTACAAAGATATGCCGTTTCTGGAGCAGATCAGAGTGACCCATAACTCGGACATCTTCATCGGGATGCACGGAGCTGGACTCACACATCTGCTCTTCCTCCCCGACTGggcttatctgttcttcaggTATAACTGTCAGGATGAAAGCTGCTACCGTGATCTAGCTCGGCTGAGGGGCGTTCACTACCTGACCTGGCAGAAACCTGAAAAAGTGTTTCCTCAGGATAAGGGGCATCACCCTACTCTCGGGGAGCATCCCAAATTCACCAATTACGCTTTCGACCTGGAGGAGTTCATGCGCTTAGTCATGCTGGCTGCAGATCATGTGATGCACCATCGGGACTGGCGTTCAAAACAGACTCGAGATGAGCTATAGCAGCATggctacacacaccacacacatcccTGCACATCCACACACATCCATATAAACACTACTGCTTACATAAACTCAAAGACGCTACAATTCACTCAAAACACTACAAAAAATACTTAGATGTATG

Function

symbol description
eogt Predicted to enable protein N-acetylglucosaminyltransferase activity. Predicted to be involved in protein O-GlcNAcylation via threonine. Predicted to be active in endoplasmic reticulum lumen. Human ortholog(s) of this gene implicated in Adams-Oliver syndrome. Orthologous to human EOGT (EGF domain specific O-linked N-acetylglucosamine transferase).

NR:

description
PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256290 True 3317 lncRNA 0.38 2 12160542 12165198
XM_022682378.1 False 1936 mRNA 0.51 16 12163373 12178610

Neighbor

gene id symbol gene type direction distance location
fam19a4 fam19a4,fam19a4b,LOC107655986,LOC107600333,LOC107729393,LOC107696804,LOC107558879 coding downstream 44683 12057532 ~ 12115859 (-)
suclg2 suclg2,LOC107729402,LOC107753779,LOC107699794 coding downstream 626127 11372257 ~ 11534415 (-)
lrig1 lrig1,LOC107716980,LOC107557776 coding downstream 1004797 11080123 ~ 11155745 (-)
LOC111195430 gria2,LOC108411138 coding downstream 1300644 10834016 ~ 10859898 (-)
lrrc38 lrrc38,LOC108439497,LOC107685631,LOC108281009,LOC107691331,LOC107555684,LOC107568719 coding downstream 1876628 10224975 ~ 10283914 (-)
tmf1 tmf1 coding upstream 3509 12182119 ~ 12207582 (-)
hmces hmces coding upstream 51806 12230416 ~ 12236146 (-)
tada3 tada3,tada3l,LOC107656064,LOC106565817 coding upstream 58276 12236886 ~ 12244320 (-)
LOC103042309 LOC108435436,LOC108254777,LOC107677511,LOC104938990,LOC107574463,LOC107715804,LOC107551799 coding upstream 80184 12258794 ~ 12289011 (-)
LOC103039006 dnah1 coding upstream 217986 12396596 ~ 12473543 (-)
G189054 NA non-coding downstream 119687 12040575 ~ 12040855 (-)
G189053 NA non-coding downstream 121454 12038777 ~ 12039088 (-)
G189052 NA non-coding downstream 151484 12008843 ~ 12009058 (-)
LOC111195377 NA non-coding downstream 403433 11755397 ~ 11757109 (-)
G188994 NA non-coding downstream 700165 11460088 ~ 11460377 (-)
G189085 rab7a,LOC107093905,LOC101061812,LOC106582926,LOC106518505 non-coding upstream 42680 12221290 ~ 12229525 (-)
G189159 NA non-coding upstream 149148 12327758 ~ 12328365 (-)
G189315 NA non-coding upstream 337331 12515941 ~ 12518663 (-)
G189316 NA non-coding upstream 349960 12528570 ~ 12528851 (-)
G189317 usp48 non-coding upstream 350534 12529144 ~ 12533333 (-)
G189055 NA other downstream 116249 12043913 ~ 12044293 (-)
G188898 NA other downstream 1169148 10990817 ~ 10991394 (-)
LOC111195437 NA other downstream 2204225 9951084 ~ 9956317 (-)
ghrh ghrh,LOC103034597,LOC108438619 other downstream 4740736 7409122 ~ 7419806 (-)
G187946 mybl2,mybl2b other downstream 4769516 7388397 ~ 7391026 (-)
mapkapk3 mapkapk3,LOC102784126,LOC107384936,LOC101473327,LOC102305022,LOC102199310,LOC106525176 other upstream 119439 12298049 ~ 12395532 (-)
LOC111195455 NA other upstream 434001 12612611 ~ 12714032 (-)
G189335 psma5,LOC107685984 other upstream 436302 12614912 ~ 12619566 (-)
tsen2 NA other upstream 884189 13062799 ~ 13076742 (-)
LOC103024926 dynlrb1,LOC106565026 other upstream 3140033 15318643 ~ 15322175 (-)

Expression


Co-expression Network