G189159


Basic Information

Item Value
gene id G189159
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 12327758 ~ 12328365 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU256397
GTGGTaaataaggtgttgctatgttgtctgtggttgttgctatggtgtctgtgttggctgctaaggtgttgctgtggtgtgtgtagtgtgtgtggtgtgttttggtgtgtgtgtagtgtatgtgtggtgtgtgtgtagtgtgtggtgtggtgtgttttggtgtgtgtgtagtgtatgtgtgtggtgtggtgtgttttggtgtgtgtgtagtgtgtgtgtgtggtgtggtgtgttttggtgtgtgtgtggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256397 True 250 lncRNA 0.47 4 12327758 12328365

Neighbor

gene id symbol gene type direction distance location
LOC103042309 LOC108435436,LOC108254777,LOC107677511,LOC104938990,LOC107574463,LOC107715804,LOC107551799 coding downstream 38747 12258794 ~ 12289011 (-)
tada3 tada3,tada3l,LOC107656064,LOC106565817 coding downstream 83438 12236886 ~ 12244320 (-)
hmces hmces coding downstream 91612 12230416 ~ 12236146 (-)
tmf1 tmf1 coding downstream 120176 12182119 ~ 12207582 (-)
fam19a4 fam19a4,fam19a4b,LOC107655986,LOC107600333,LOC107729393,LOC107696804,LOC107558879 coding downstream 211899 12057532 ~ 12115859 (-)
LOC103039006 dnah1 coding upstream 68231 12396596 ~ 12473543 (-)
chchd4 chchd4,chchd4a,LOC107574929,LOC107718204 coding upstream 180547 12508912 ~ 12512461 (-)
ldlrad2 ldlrad2 coding upstream 190516 12518881 ~ 12526579 (-)
LOC103028365 LOC103028365,LOC108435392,LOC104949255 coding upstream 238506 12566871 ~ 12573087 (-)
atxn7l2 atxn7l2 coding upstream 245854 12574219 ~ 12592093 (-)
G189085 rab7a,LOC107093905,LOC101061812,LOC106582926,LOC106518505 non-coding downstream 98233 12221290 ~ 12229525 (-)
G189054 NA non-coding downstream 286903 12040575 ~ 12040855 (-)
G189053 NA non-coding downstream 288670 12038777 ~ 12039088 (-)
G189052 NA non-coding downstream 318700 12008843 ~ 12009058 (-)
LOC111195377 NA non-coding downstream 570649 11755397 ~ 11757109 (-)
G189315 NA non-coding upstream 187576 12515941 ~ 12518663 (-)
G189316 NA non-coding upstream 200205 12528570 ~ 12528851 (-)
G189317 usp48 non-coding upstream 200779 12529144 ~ 12533333 (-)
G189319 usp48 non-coding upstream 209885 12538250 ~ 12540612 (-)
G189344 sort1 non-coding upstream 320946 12649311 ~ 12651090 (-)
eogt eogt,LOC107729408 other downstream 149148 12160542 ~ 12178610 (-)
G189055 NA other downstream 283465 12043913 ~ 12044293 (-)
G188898 NA other downstream 1336364 10990817 ~ 10991394 (-)
LOC111195437 NA other downstream 2371441 9951084 ~ 9956317 (-)
ghrh ghrh,LOC103034597,LOC108438619 other downstream 4907952 7409122 ~ 7419806 (-)
LOC111195455 NA other upstream 284246 12612611 ~ 12714032 (-)
G189335 psma5,LOC107685984 other upstream 286547 12614912 ~ 12619566 (-)
tsen2 NA other upstream 734434 13062799 ~ 13076742 (-)
LOC103024926 dynlrb1,LOC106565026 other upstream 2990278 15318643 ~ 15322175 (-)
LOC103026676 LOC108424672,LOC108254855,LOC107691347,LOC107749448,LOC107685659,LOC107551122,LOC106582641 other upstream 3080842 15409207 ~ 15466584 (-)

Expression


Co-expression Network