G189376


Basic Information

Item Value
gene id G189376
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 12879945 ~ 12880344 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU256699
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Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256699 True 400 lncRNA 0.19 1 12879945 12880344

Neighbor

gene id symbol gene type direction distance location
ippk ippk,LOC107755999,LOC107658385 coding downstream 25552 12820875 ~ 12854393 (-)
LOC111195440 NA coding downstream 94760 12770735 ~ 12785185 (-)
LOC103030591 LOC108435310,LOC108281021,LOC107715788,LOC107659540,LOC107575639 coding downstream 123762 12714488 ~ 12756183 (-)
gpr61 gpr61,LOC108434964 coding downstream 192827 12673366 ~ 12687118 (-)
LOC103029205 LOC103029205,LOC108435351,LOC107659543,LOC107715787 coding downstream 213726 12662572 ~ 12666219 (-)
LOC103025083 LOC108431510,LOC107586924,LOC107756006,LOC107593103,LOC107704447,LOC105893506 coding upstream 478 12880822 ~ 12884782 (-)
shisa5 NA coding upstream 24986 12905330 ~ 12922980 (-)
nuf2 nuf2 coding upstream 45712 12926056 ~ 12940460 (-)
LOC103034476 zgc:77375,LOC108431553,LOC108254961,LOC107700631,LOC107758152 coding upstream 72166 12952510 ~ 12972311 (-)
LOC103027102 isy1,LOC108431508,LOC108254962,LOC107700632 coding upstream 93596 12973940 ~ 12980817 (-)
G189352 NA non-coding downstream 111234 12768010 ~ 12768711 (-)
G189349 NA non-coding downstream 168932 12709673 ~ 12711013 (-)
G189348 rrp9,LOC107659541 non-coding downstream 175233 12704268 ~ 12704712 (-)
G189345 sort1 non-coding downstream 221181 12653060 ~ 12658764 (-)
G189344 sort1 non-coding downstream 228855 12649311 ~ 12651090 (-)
G189380 NA non-coding upstream 10490 12890834 ~ 12891269 (-)
G189381 NA non-coding upstream 14519 12894863 ~ 12896608 (-)
G189385 NA non-coding upstream 22593 12902937 ~ 12903160 (-)
G189402 NA non-coding upstream 149826 13030170 ~ 13032240 (-)
G189404 NA non-coding upstream 170215 13050559 ~ 13053733 (-)
LOC111195455 NA other downstream 165913 12612611 ~ 12714032 (-)
G189335 psma5,LOC107685984 other downstream 260379 12614912 ~ 12619566 (-)
mapkapk3 mapkapk3,LOC102784126,LOC107384936,LOC101473327,LOC102305022,LOC102199310,LOC106525176 other downstream 484413 12298049 ~ 12395532 (-)
eogt eogt,LOC107729408 other downstream 701335 12160542 ~ 12178610 (-)
G189055 NA other downstream 835652 12043913 ~ 12044293 (-)
tsen2 NA other upstream 182455 13062799 ~ 13076742 (-)
LOC103024926 dynlrb1,LOC106565026 other upstream 2438299 15318643 ~ 15322175 (-)
LOC103026676 LOC108424672,LOC108254855,LOC107691347,LOC107749448,LOC107685659,LOC107551122,LOC106582641 other upstream 2528863 15409207 ~ 15466584 (-)
G190405 fbln2,LOC108424659,LOC107727849,LOC107691338 other upstream 3465357 16345701 ~ 16460928 (-)
ptpdc1 NA other upstream 3689279 16569623 ~ 16599317 (-)

Expression


Co-expression Network