G71523


Basic Information

Item Value
gene id G71523
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 5034028 ~ 5034267 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU81518
CCCTGATGAAGAATAATACATTTTAAAACGTGCTTTTTATGCGTAGAAATGTCTCTAAACAACTGAGATTTTGTATGATTGTTGTCAGGCAATGTTTTCTGTAGTATAAGTATACTGTTTTGTGTTAAATATACGTTTGTTACATTTAAAATAACATTGCTTTCTGTTTATTTAATAAGCTCTGCTCTTTATTGTATTTTGATGTACCCGCTGTGCCGGCGAATTTGCAAATAACTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81518 True 240 lncRNA 0.31 1 5034028 5034267

Neighbor

gene id symbol gene type direction distance location
CI01000012_05006941_05018373 SAV1 coding upstream 15148 5006941 ~ 5018880 (+)
CI01000012_04981435_05004449 NIN coding upstream 28916 4981435 ~ 5005112 (+)
CI01000012_04966772_04976751 PYGL coding upstream 57125 4966715 ~ 4976903 (+)
CI01000012_04939174_04962741 TRIM9 coding upstream 71287 4938146 ~ 4962741 (+)
CI01000012_04722087_04836261 NA coding upstream 196454 4722087 ~ 4837574 (+)
CI01000012_05035890_05063488 MAP4K5 coding downstream 1259 5035526 ~ 5064475 (+)
CI01000012_05065985_05066340 NA coding downstream 31718 5065985 ~ 5066870 (+)
CI01000012_05067336_05074406 CDKL1 coding downstream 32661 5066928 ~ 5074539 (+)
CI01000012_05085822_05090635 L2HGDH coding downstream 50836 5085103 ~ 5090910 (+)
CI01000012_05094462_05108315 SOS2 coding downstream 60195 5094462 ~ 5109691 (+)
G71518 NA non-coding upstream 85740 4948035 ~ 4948288 (+)
G71513 NA non-coding upstream 103693 4927694 ~ 4930335 (+)
G71512 NA non-coding upstream 107391 4924984 ~ 4926637 (+)
G71511 NA non-coding upstream 111961 4921724 ~ 4922067 (+)
G71506 NA non-coding upstream 117755 4916047 ~ 4916273 (+)
G71172 NA non-coding downstream 103203 5137470 ~ 5139968 (+)
G71529 NA non-coding downstream 127242 5161509 ~ 5162433 (+)
G71171 NA non-coding downstream 270137 5304404 ~ 5305573 (+)
G71225 NA non-coding downstream 374955 5409222 ~ 5411516 (+)
G71548 NA non-coding downstream 516226 5550493 ~ 5561433 (+)
CI01000012_04495631_04501066 NA other upstream 533939 4495631 ~ 4501066 (+)
CI01000012_04424569_04425090 NA other upstream 608381 4424569 ~ 4425756 (+)
G70029 NA other upstream 2402643 2622478 ~ 2631385 (+)
G68725 NA other upstream 4349172 683523 ~ 684856 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 142628 5176895 ~ 5180970 (+)
G71199 NA other downstream 378983 5413250 ~ 5416785 (+)
G71218 NA other downstream 501585 5535852 ~ 5538384 (+)
G71221 NA other downstream 504258 5538525 ~ 5540456 (+)

Expression


Co-expression Network