G71518


Basic Information

Item Value
gene id G71518
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 4948035 ~ 4948288 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU81513
GTAAGTATCGTCTGTTGCTTCCGAAGGGCAGTACTAAATGAAAAAAATTGATATTTAAACGAAATAAGAAAAATTTGTACATCTTCATCCTGTTCAAAAGTTTTCACCCCCAGACTCTCAATGAATCGTGTTTCCTTCTGGAGCATCAGTGAATGTTTGAGACTCTCAATTGTCCTCAGTGTGAAAAGATGGATCTCAAATCATTCAGTCACTGTTGTAAAGGGTTCAA

Function

NR:

description
ubiquitin-conjugating enzyme E2 D2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81513 True 229 lncRNA 0.37 2 4948035 4948288

Neighbor

gene id symbol gene type direction distance location
CI01000012_04722087_04836261 NA coding upstream 110461 4722087 ~ 4837574 (+)
CI01000012_04647182_04692241 KCNH5, KCNH5B coding upstream 255559 4647182 ~ 4692476 (+)
CI01000012_04595199_04620295 PPP2R5EB, 2A5E, PPP2R5E1, PPP2R5E coding upstream 327582 4593867 ~ 4620453 (+)
CI01000012_04578508_04582452 WDR89 coding upstream 365425 4576995 ~ 4582610 (+)
CI01000012_04551570_04571150 SGPP1 coding upstream 376696 4551169 ~ 4571339 (+)
CI01000012_04966772_04976751 PYGL coding downstream 18427 4966715 ~ 4976903 (+)
CI01000012_04981435_05004449 NIN coding downstream 33147 4981435 ~ 5005112 (+)
CI01000012_05006941_05018373 SAV1 coding downstream 58653 5006941 ~ 5018880 (+)
CI01000012_05035890_05063488 MAP4K5 coding downstream 87238 5035526 ~ 5064475 (+)
CI01000012_05065985_05066340 NA coding downstream 117697 5065985 ~ 5066870 (+)
G71513 NA non-coding upstream 17700 4927694 ~ 4930335 (+)
G71512 NA non-coding upstream 21398 4924984 ~ 4926637 (+)
G71511 NA non-coding upstream 25968 4921724 ~ 4922067 (+)
G71506 NA non-coding upstream 31762 4916047 ~ 4916273 (+)
G71503 NA non-coding upstream 41820 4905925 ~ 4906215 (+)
G71523 NA non-coding downstream 85740 5034028 ~ 5034267 (+)
G71172 NA non-coding downstream 189182 5137470 ~ 5139968 (+)
G71529 NA non-coding downstream 213221 5161509 ~ 5162433 (+)
G71171 NA non-coding downstream 356116 5304404 ~ 5305573 (+)
G71225 NA non-coding downstream 460934 5409222 ~ 5411516 (+)
CI01000012_04495631_04501066 NA other upstream 447946 4495631 ~ 4501066 (+)
CI01000012_04424569_04425090 NA other upstream 522388 4424569 ~ 4425756 (+)
G70029 NA other upstream 2316650 2622478 ~ 2631385 (+)
G68725 NA other upstream 4263179 683523 ~ 684856 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 228607 5176895 ~ 5180970 (+)
G71199 NA other downstream 464962 5413250 ~ 5416785 (+)
G71218 NA other downstream 587564 5535852 ~ 5538384 (+)
G71221 NA other downstream 590237 5538525 ~ 5540456 (+)
G71548 NA other downstream 602205 5550493 ~ 5561433 (+)

Expression


Co-expression Network