G71529


Basic Information

Item Value
gene id G71529
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 5161509 ~ 5162433 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU81524
TCCAGGATTATTTGATGAATAGAAAGTTTAAAAGAACCGTATTTATCTGAAATGGAAAGCTTTTGTACCATTATACATGTCTTTACTGTCACTTTTAATCAGTTTAATGCATCCTTGCTGAATAAAAGTTTTAATATCTTTCCAAAAAATTTTTACTGACCCCAAACTTTTGAATAGTAGTTGTCAGTAGTGTATAATGTTACAAAACCTTTCTATTTTAGATAAATGATTTTCTTTTGAACTTTATAGTCATCAAAGATTCCTGAAAAAAATTGTACAAAAAAAATTGATAATAAGAAATGTTTCTTGAGCAGCAAATCAGCATATTAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGCCTTTTTACATTGCATTTTAACCCTAATATGGTCTTTGGGGTGCGTTCCAAAAAAATGGTTCCCTTCATCTCAGTGTCATGAGATTTTGAGACTTTTGTTATATTATCTATTATATTATCTAAACACACACACAAAAAGTCACACTCAGGGTCTTTGGAGTCCGAATGGACCCCACATTGAAAATGAATGGGAAAGGTGAAAAATTAAGAGTGTTTTATTTTTCAATAAAATCAATAAATCCGGCATAAATCTGAATTTTCACACAGAAATGAATGCATGGTAGTAGAGCACAAGTGCAATGTGGAACAAACATGCTCACTCACACATACACACACAAACACGTGTGACTACAACAGACAGCATTTGTATAGAATTTGGCAAACAAAATCAGCCACAAATGCAGAAAAATGCATATATGAAAGGGTGAGACCTAACACACACACACACATGCACGCACACAAATAAACACATTCACGTGCACACACGCACGCATCCACACCCACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81524 True 900 lncRNA 0.34 2 5161509 5162433

Neighbor

gene id symbol gene type direction distance location
CI01000012_05143891_05154080 NA coding upstream 7330 5143299 ~ 5154179 (+)
CI01000012_05124400_05129545 NA coding upstream 31763 5124160 ~ 5129746 (+)
CI01000012_05094462_05108315 SOS2 coding upstream 51818 5094462 ~ 5109691 (+)
CI01000012_05085822_05090635 L2HGDH coding upstream 70599 5085103 ~ 5090910 (+)
CI01000012_05067336_05074406 CDKL1 coding upstream 86970 5066928 ~ 5074539 (+)
CI01000012_05168339_05174369 SYNJ2BP, DESI2 coding downstream 5727 5168160 ~ 5174842 (+)
CI01000012_05177587_05180517 SRSF5A coding downstream 14463 5176895 ~ 5180970 (+)
CI01000012_05184593_05185298 NA coding downstream 22160 5184593 ~ 5185481 (+)
CI01000012_05198747_05229460 PACS2 coding downstream 35739 5198172 ~ 5229678 (+)
CI01000012_05233556_05252071 DCAF5 coding downstream 70792 5233225 ~ 5252509 (+)
G71172 NA non-coding upstream 21541 5137470 ~ 5139968 (+)
G71523 NA non-coding upstream 127242 5034028 ~ 5034267 (+)
G71518 NA non-coding upstream 213221 4948035 ~ 4948288 (+)
G71513 NA non-coding upstream 231174 4927694 ~ 4930335 (+)
G71512 NA non-coding upstream 234872 4924984 ~ 4926637 (+)
G71171 NA non-coding downstream 141971 5304404 ~ 5305573 (+)
G71225 NA non-coding downstream 246789 5409222 ~ 5411516 (+)
G71548 NA non-coding downstream 388060 5550493 ~ 5561433 (+)
G71559 NA non-coding downstream 410384 5572817 ~ 5573228 (+)
G71562 NA non-coding downstream 446417 5608850 ~ 5611605 (+)
CI01000012_04495631_04501066 NA other upstream 661420 4495631 ~ 4501066 (+)
CI01000012_04424569_04425090 NA other upstream 735862 4424569 ~ 4425756 (+)
G70029 NA other upstream 2530124 2622478 ~ 2631385 (+)
G68725 NA other upstream 4476653 683523 ~ 684856 (+)
G71199 NA other downstream 250817 5413250 ~ 5416785 (+)
G71218 NA other downstream 373419 5535852 ~ 5538384 (+)
G71221 NA other downstream 376092 5538525 ~ 5540456 (+)

Expression


Co-expression Network