sox13 (sox13)


Basic Information

Item Value
gene id sox13
gene name sox13
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 6897991 ~ 6948954 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682312.1
GGCCCAGGTTACAGCATGACTTGCTCCACCAGCTTCCAGCACCACCACATATCTGCACTGCGTCTGCAAGACAAGCCATGGGCCGTGAGAGCCGCCTGCGGATTCTTGAGAATGTGTGAGCGTAGCCCTCCTGCTCTGCATCCCCATGCTAATGGTAATGTGACCATGGTGGGTGTTGGTGtcaagctggaggaggaggagtctgGAGAAGGAGGCGGAGTCAGAGAGCGTGAGTCACGTCAATCTTCGCCCTCTTCTGCCTGGTCGGTGCGTCAACCAATCGAACGAGGGGATGATGAAAAGCCTACATCCCTCATCTCTCGATCTCCTTTGGCAAGTTCTCCCAGTAAAGAGAGGCCACACACCCTCAGTCCTTCCAGTCTGGATGGAGTGAACAGAGCCCAGGACAGGCCTGAAGCCCAGCCCAACGTCAGCGAGGTTCTGCCCACCATCGAGAAACTGCTGAATGCAGACTGGAGAGAAAAGATTTTGGGAAAAGGATTCCAGAGCACTGCTAATGTCAAAGgcacTCAGGAGAGCCTGGCTGAGAAGGAGCTGCAGCTGTTGCTGATGATTAACCAGTTGTCTGGGTTGAGGGAGCAGTTGCTGGGAGCACACTCGGAGCAGAGGAACATGGCTGCTCTGCtgctggagaaacagcagcagcagatggaGCTGGCACGGCAGCAACAGGAACAGATTgccaaacagcagcagcagctaataCAGCAGCAGCATAAGATCAACCTTCTACAGCAGCAGATCCAGCAGGTGAACTTGCCCTATGTGATGATACCTGCCTTCCACCCCAACACACAGCCACTGCCCGTGTCCACTGAAGCACAGATGGGCCTGCCCCTTCAGCCTATTCCCTGTAAGCCAGTTGAATATCCCATGCAGCTACTCCCGAACCCCCACTCCACGCCTGTCAAAAGATCCAGCGGTACAGTCTTTCGACAGGAGAGCACTCAGCCCCTGAACCTCACAGCTAAACCCAAGACCCCCAGCCCACAGACTCTGGAGCTGACCTCTGCCCACCTGCAGCCCAGCTACAGGCCCAGAGAGCTGTCCCACAGCCCCCCCAGACCTTCGCTTAGCCTGGGCTTCTTGGGTGAGGGGGACGTTGTGACCCAAGCCATCCACGATGCCCAGCAGCTGTTGCGTGGAGGCCAGGGCCCAGCGGGCCGAGAAAGGGACCGGGATAGGGACAGTAGCACGAGGCTGAGCGACTATAATAAGGAGGTGTCCCGAGCTGACCGGCTGTCTCACATGGACCGCAGTGAAGATGGACAGTCAATGAGAACGAACGAGGAGCACCTCAGCAGTGATTCTGAAGGGCAGATCACAGTTCCTGGAGTGGGGGGCTACAGTGACAGCCGGACCACCTCTTCTGGGCATATCAAGAGGCCCATGAACGCGTTCATGGTGTGGGCCAAAGACGAGCGCCGCCGAATCCTGCAGGCTTTTCCCGACATGCACAACTCCAGCATCAGCAAGATCCTGGGCTCACGCTGGAAGTCCATGTCCAACCAGGAGAAGCAGCCGTACTATGAGGAGCAGGCCAGGCTGAGCCGGCAGCATCTGGAGCGCTATCCCGACTACAAATACAAACCCCGGCCCAAGCGCACCTGCATCGTAGAGGGCAGGCGGCTGCGCGTGGGCGAGTATAAGGCCATGATGAAGAGCCGGAGACAGGAGCAGCGCGCCTCATACCCACCCAGccaatcagagcagcaACTGCATTACCCCTCAGCTGAGGGTCAGTACCCCAGCACTCCGGTCTCCATGGCCCTCCCCCTGCACcctgcactgctggagcactaCCTGCCCCGTCCCCTGGAGCCCCCGCAGGGCCGAGGCCACGACGAGCCGGAAGCCAGAGCCAAGCAGCCTTACAGCGAGGGAGAGGACAGCGACGGAGGAGAGCGGAGCGAGGGGGAGCTGGTGGTCCTCACTGACTGAGAGAGAGGGGACAGGGAGGAATTTCTGTACATGCAGTGAGGAAACTTTGGGGTGTGGGGGGTCAGTGGGGGTTATTTTGAAGTGGTTCAGTTTGAGGGTCTCGGAGAAGTGCAGCTTTGCGTTACATAGACTATATGTTATTTTACTCCAGCAGCGATGTCTGATGTTCAGGGAAGTTGTAGTTAGTTGAGAAGCCTGACCAAAGCCTAATAAATCAAGGTttggttttactgtgtttttataatCTAACGTTCACACGCTTCTATTGTTGACCATAATTCATGGCAAGCTCTTgagactttttattttaagaccTTCATTTAGAGGGCTTTAAAATGCAGAATACCATCATATTtcttgtgtttatttctgtcaAAGGGATAAATGTGAAACCGTTGGGAATCAGACTTAATGGTAATGGACTATAAAGCAATTCAGGCAGCCAAATAATACTGCATTAAGAAAAGGTCACTGTTCTATAGTTCTATTAGTTTTATTGGATCTTATTCACGTGAC
>XM_022682313.1
GGCCCAGGTTACAGCATGACTTGCTCCACCAGCTTCCAGCACCACCACATATCTGCACTGCGTCTGCAAGACAAGCCATGGGCCGTGAGAGCCGCCTGCGGATTCTTGAGAATGTGTGAGCGTAGCCCTCCTGCTCTGCATCCCCATGCTAATGGTAATGTGACCATGGTGGGTGTTGGTGtcaagctggaggaggaggagtctgGAGAAGGAGGCGGAGTCAGAGAGCGTGAGTCACGTCAATCTTCGCCCTCTTCTGCCTGGTCGGTGCGTCAACCAATCGAACGAGGGGATGATGAAAAGCCTACATCCCTCATCTCTCGATCTCCTTTGGCAAGTTCTCCCAGTAAAGAGAGGCCACACACCCTCAGTCCTTCCAGTCTGGATGGAGTGAACAGAGCCCAGGACAGGCCTGAAGCCCAGCCCAACGTCAGCGAGGTTCTGCCCACCATCGAGAAACTGCTGAATGCAGACTGGAGAGAAAAGATTTTGGGAAAAGGATTCCAGAGCACTGCTAATGTCAAAGgcacTCAGGAGAGCCTGGCTGAGAAGGAGCTGCAGCTGTTGCTGATGATTAACCAGTTGTCTGGGTTGAGGGAGCAGTTGCTGGGAGCACACTCGGAGCAGAGGAACATGGCTGCTCTGCtgctggagaaacagcagcagcagatggaGCTGGCACGGCAGCAACAGGAACAGATTgccaaacagcagcagcagctaataCAGCAGCAGCATAAGATCAACCTTCTACAGCAGCAGATCCAGGTGAACTTGCCCTATGTGATGATACCTGCCTTCCACCCCAACACACAGCCACTGCCCGTGTCCACTGAAGCACAGATGGGCCTGCCCCTTCAGCCTATTCCCTGTAAGCCAGTTGAATATCCCATGCAGCTACTCCCGAACCCCCACTCCACGCCTGTCAAAAGATCCAGCGGTACAGTCTTTCGACAGGAGAGCACTCAGCCCCTGAACCTCACAGCTAAACCCAAGACCCCCAGCCCACAGACTCTGGAGCTGACCTCTGCCCACCTGCAGCCCAGCTACAGGCCCAGAGAGCTGTCCCACAGCCCCCCCAGACCTTCGCTTAGCCTGGGCTTCTTGGGTGAGGGGGACGTTGTGACCCAAGCCATCCACGATGCCCAGCAGCTGTTGCGTGGAGGCCAGGGCCCAGCGGGCCGAGAAAGGGACCGGGATAGGGACAGTAGCACGAGGCTGAGCGACTATAATAAGGAGGTGTCCCGAGCTGACCGGCTGTCTCACATGGACCGCAGTGAAGATGGACAGTCAATGAGAACGAACGAGGAGCACCTCAGCAGTGATTCTGAAGGGCAGATCACAGTTCCTGGAGTGGGGGGCTACAGTGACAGCCGGACCACCTCTTCTGGGCATATCAAGAGGCCCATGAACGCGTTCATGGTGTGGGCCAAAGACGAGCGCCGCCGAATCCTGCAGGCTTTTCCCGACATGCACAACTCCAGCATCAGCAAGATCCTGGGCTCACGCTGGAAGTCCATGTCCAACCAGGAGAAGCAGCCGTACTATGAGGAGCAGGCCAGGCTGAGCCGGCAGCATCTGGAGCGCTATCCCGACTACAAATACAAACCCCGGCCCAAGCGCACCTGCATCGTAGAGGGCAGGCGGCTGCGCGTGGGCGAGTATAAGGCCATGATGAAGAGCCGGAGACAGGAGCAGCGCGCCTCATACCCACCCAGccaatcagagcagcaACTGCATTACCCCTCAGCTGAGGGTCAGTACCCCAGCACTCCGGTCTCCATGGCCCTCCCCCTGCACcctgcactgctggagcactaCCTGCCCCGTCCCCTGGAGCCCCCGCAGGGCCGAGGCCACGACGAGCCGGAAGCCAGAGCCAAGCAGCCTTACAGCGAGGGAGAGGACAGCGACGGAGGAGAGCGGAGCGAGGGGGAGCTGGTGGTCCTCACTGACTGAGAGAGAGGGGACAGGGAGGAATTTCTGTACATGCAGTGAGGAAACTTTGGGGTGTGGGGGGTCAGTGGGGGTTATTTTGAAGTGGTTCAGTTTGAGGGTCTCGGAGAAGTGCAGCTTTGCGTTACATAGACTATATGTTATTTTACTCCAGCAGCGATGTCTGATGTTCAGGGAAGTTGTAGTTAGTTGAGAAGCCTGACCAAAGCCTAATAAATCAAGGTttggttttactgtgtttttataatCTAACGTTCACACGCTTCTATTGTTGACCATAATTCATGGCAAGCTCTTgagactttttattttaagaccTTCATTTAGAGGGCTTTAAAATGCAGAATACCATCATATTtcttgtgtttatttctgtcaAAGGGATAAATGTGAAACCGTTGGGAATCAGACTTAATGGTAATGGACTATAAAGCAATTCAGGCAGCCAAATAATACTGCATTAAGAAAAGGTCACTGTTCTATAGTTCTATTAGTTTTATTGGATCTTATTCACGTGAC
>XM_022682314.1
GGCCCAGGTTACAGCATGACTTGCTCCACCAGCTTCCAGCACCACCACATATCTGCACTGCGTCTGCAAGACAAGCCATGGGCCGTGAGAGCCGCCTGCGGATTCTTGAGAATGTGTGAGCGTAGCCCTCCTGCTCTGCATCCCCATGCTAATGGTAATGTGACCATGGTGGGTGTTGGTGtcaagctggaggaggaggagtctgGAGAAGGAGGCGGAGTCAGAGAGCGTGAGTCACGTCAATCTTCGCCCTCTTCTGCCTGGTCGGTGCGTCAACCAATCGAACGAGGGGATGATGAAAAGCCTACATCCCTCATCTCTCGATCTCCTTTGGCAAGTTCTCCCAGTAAAGAGAGGCCACACACCCTCAGTCCTTCCAGTCTGGATGGAGTGAACAGAGCCCAGGACAGGCCTGAAGCCCAGCCCAACGTCAGCGAGGTTCTGCCCACCATCGAGAAACTGCTGAATGCAGACTGGAGAGAAAAGATTTTGGGAAAAGGATTCCAGAGCACTGCTAATGTCAAAGgcacTCAGGAGAGCCTGGCTGAGAAGGAGCTGCAGCTGTTGCTGATGATTAACCAGTTGTCTGGGTTGAGGGAGCAGTTGCTGGGAGCACACTCGGAGCAGAGGAACATGGCTGCTCTGCtgctggagaaacagcagcagcagatggaGCTGGCACGGCAGCAACAGGAACAGATTgccaaacagcagcagcagctaataCAGCAGCAGCATAAGATCAACCTTCTACAGCAGCAGATCCAGCAGGTGAACTTGCCCTATGTGATGATACCTGCCTTCCACCCCAACACACAGCCACTGCCCGTGTCCACTGAAGCACAGATGGGCCTGCCCCTTCAGCCTATTCCCTTTGAATATCCCATGCAGCTACTCCCGAACCCCCACTCCACGCCTGTCAAAAGATCCAGCGGTACAGTCTTTCGACAGGAGAGCACTCAGCCCCTGAACCTCACAGCTAAACCCAAGACCCCCAGCCCACAGACTCTGGAGCTGACCTCTGCCCACCTGCAGCCCAGCTACAGGCCCAGAGAGCTGTCCCACAGCCCCCCCAGACCTTCGCTTAGCCTGGGCTTCTTGGGTGAGGGGGACGTTGTGACCCAAGCCATCCACGATGCCCAGCAGCTGTTGCGTGGAGGCCAGGGCCCAGCGGGCCGAGAAAGGGACCGGGATAGGGACAGTAGCACGAGGCTGAGCGACTATAATAAGGAGGTGTCCCGAGCTGACCGGCTGTCTCACATGGACCGCAGTGAAGATGGACAGTCAATGAGAACGAACGAGGAGCACCTCAGCAGTGATTCTGAAGGGCAGATCACAGTTCCTGGAGTGGGGGGCTACAGTGACAGCCGGACCACCTCTTCTGGGCATATCAAGAGGCCCATGAACGCGTTCATGGTGTGGGCCAAAGACGAGCGCCGCCGAATCCTGCAGGCTTTTCCCGACATGCACAACTCCAGCATCAGCAAGATCCTGGGCTCACGCTGGAAGTCCATGTCCAACCAGGAGAAGCAGCCGTACTATGAGGAGCAGGCCAGGCTGAGCCGGCAGCATCTGGAGCGCTATCCCGACTACAAATACAAACCCCGGCCCAAGCGCACCTGCATCGTAGAGGGCAGGCGGCTGCGCGTGGGCGAGTATAAGGCCATGATGAAGAGCCGGAGACAGGAGCAGCGCGCCTCATACCCACCCAGccaatcagagcagcaACTGCATTACCCCTCAGCTGAGGGTCAGTACCCCAGCACTCCGGTCTCCATGGCCCTCCCCCTGCACcctgcactgctggagcactaCCTGCCCCGTCCCCTGGAGCCCCCGCAGGGCCGAGGCCACGACGAGCCGGAAGCCAGAGCCAAGCAGCCTTACAGCGAGGGAGAGGACAGCGACGGAGGAGAGCGGAGCGAGGGGGAGCTGGTGGTCCTCACTGACTGAGAGAGAGGGGACAGGGAGGAATTTCTGTACATGCAGTGAGGAAACTTTGGGGTGTGGGGGGTCAGTGGGGGTTATTTTGAAGTGGTTCAGTTTGAGGGTCTCGGAGAAGTGCAGCTTTGCGTTACATAGACTATATGTTATTTTACTCCAGCAGCGATGTCTGATGTTCAGGGAAGTTGTAGTTAGTTGAGAAGCCTGACCAAAGCCTAATAAATCAAGGTttggttttactgtgtttttataatCTAACGTTCACACGCTTCTATTGTTGACCATAATTCATGGCAAGCTCTTgagactttttattttaagaccTTCATTTAGAGGGCTTTAAAATGCAGAATACCATCATATTtcttgtgtttatttctgtcaAAGGGATAAATGTGAAACCGTTGGGAATCAGACTTAATGGTAATGGACTATAAAGCAATTCAGGCAGCCAAATAATACTGCATTAAGAAAAGGTCACTGTTCTATAGTTCTATTAGTTTTATTGGATCTTATTCACGTGAC
>XM_022682315.1
CTTGGCCGTGGGAAGGCTTAGATTTCAGAAGTGCTTCAGCTGAGCAGCTCATAAAGCCACTGAATCTGATGTTATCTTGCTTCGTAAAGCGTGGCTCCTCCATCCCtccaaaaaatctaaacaaaaatgGCTCCTGATCCGAACAACAGAATGTGTGAGCGTAGCCCTCCTGCTCTGCATCCCCATGCTAATGGTAATGTGACCATGGTGGGTGTTGGTGtcaagctggaggaggaggagtctgGAGAAGGAGGCGGAGTCAGAGAGCGTGAGTCACGTCAATCTTCGCCCTCTTCTGCCTGGTCGGTGCGTCAACCAATCGAACGAGGGGATGATGAAAAGCCTACATCCCTCATCTCTCGATCTCCTTTGGCAAGTTCTCCCAGTAAAGAGAGGCCACACACCCTCAGTCCTTCCAGTCTGGATGGAGTGAACAGAGCCCAGGACAGGCCTGAAGCCCAGCCCAACGTCAGCGAGGTTCTGCCCACCATCGAGAAACTGCTGAATGCAGACTGGAGAGAAAAGATTTTGGGAAAAGGATTCCAGAGCACTGCTAATGTCAAAGgcacTCAGGAGAGCCTGGCTGAGAAGGAGCTGCAGCTGTTGCTGATGATTAACCAGTTGTCTGGGTTGAGGGAGCAGTTGCTGGGAGCACACTCGGAGCAGAGGAACATGGCTGCTCTGCtgctggagaaacagcagcagcagatggaGCTGGCACGGCAGCAACAGGAACAGATTgccaaacagcagcagcagctaataCAGCAGCAGCATAAGATCAACCTTCTACAGCAGCAGATCCAGCAGGTGAACTTGCCCTATGTGATGATACCTGCCTTCCACCCCAACACACAGCCACTGCCCGTGTCCACTGAAGCACAGATGGGCCTGCCCCTTCAGCCTATTCCCTGTAAGCCAGTTGAATATCCCATGCAGCTACTCCCGAACCCCCACTCCACGCCTGTCAAAAGATCCAGCGGTACAGTCTTTCGACAGGAGAGCACTCAGCCCCTGAACCTCACAGCTAAACCCAAGACCCCCAGCCCACAGACTCTGGAGCTGACCTCTGCCCACCTGCAGCCCAGCTACAGGCCCAGAGAGCTGTCCCACAGCCCCCCCAGACCTTCGCTTAGCCTGGGCTTCTTGGGTGAGGGGGACGTTGTGACCCAAGCCATCCACGATGCCCAGCAGCTGTTGCGTGGAGGCCAGGGCCCAGCGGGCCGAGAAAGGGACCGGGATAGGGACAGTAGCACGAGGCTGAGCGACTATAATAAGGAGGTGTCCCGAGCTGACCGGCTGTCTCACATGGACCGCAGTGAAGATGGACAGTCAATGAGAACGAACGAGGAGCACCTCAGCAGTGATTCTGAAGGGCAGATCACAGTTCCTGGAGTGGGGGGCTACAGTGACAGCCGGACCACCTCTTCTGGGCATATCAAGAGGCCCATGAACGCGTTCATGGTGTGGGCCAAAGACGAGCGCCGCCGAATCCTGCAGGCTTTTCCCGACATGCACAACTCCAGCATCAGCAAGATCCTGGGCTCACGCTGGAAGTCCATGTCCAACCAGGAGAAGCAGCCGTACTATGAGGAGCAGGCCAGGCTGAGCCGGCAGCATCTGGAGCGCTATCCCGACTACAAATACAAACCCCGGCCCAAGCGCACCTGCATCGTAGAGGGCAGGCGGCTGCGCGTGGGCGAGTATAAGGCCATGATGAAGAGCCGGAGACAGGAGCAGCGCGCCTCATACCCACCCAGccaatcagagcagcaACTGCATTACCCCTCAGCTGAGGGTCAGTACCCCAGCACTCCGGTCTCCATGGCCCTCCCCCTGCACcctgcactgctggagcactaCCTGCCCCGTCCCCTGGAGCCCCCGCAGGGCCGAGGCCACGACGAGCCGGAAGCCAGAGCCAAGCAGCCTTACAGCGAGGGAGAGGACAGCGACGGAGGAGAGCGGAGCGAGGGGGAGCTGGTGGTCCTCACTGACTGAGAGAGAGGGGACAGGGAGGAATTTCTGTACATGCAGTGAGGAAACTTTGGGGTGTGGGGGGTCAGTGGGGGTTATTTTGAAGTGGTTCAGTTTGAGGGTCTCGGAGAAGTGCAGCTTTGCGTTACATAGACTATATGTTATTTTACTCCAGCAGCGATGTCTGATGTTCAGGGAAGTTGTAGTTAGTTGAGAAGCCTGACCAAAGCCTAATAAATCAAGGTttggttttactgtgtttttataatCTAACGTTCACACGCTTCTATTGTTGACCATAATTCATGGCAAGCTCTTgagactttttattttaagaccTTCATTTAGAGGGCTTTAAAATGCAGAATACCATCATATTtcttgtgtttatttctgtcaAAGGGATAAATGTGAAACCGTTGGGAATCAGACTTAATGGTAATGGACTATAAAGCAATTCAGGCAGCCAAATAATACTGCATTAAGAAAAGGTCACTGTTCTATAGTTCTATTAGTTTTATTGGATCTTATTCACGTGAC
>XM_022682316.1
GACTCCCATGTGTTTAGGGAGCCCGGACAGCGCTGGGAGCGGACtccgcgcgtgtgtgtgtggtggagtgtgtgtgtgtgtgtgtaccgtgCTCTCGTCGCTGAGCTGGATGTATTATATGTCACAGATTAATAACGCGTCGTTTTTACCTTGGCGGGAAGAGCCGCTGCGGTCTCCCCTGACAACCAGGCGGATCCAGAAGTTTGGCTTCCACAGTTTTTAAACTGCAGTGAATGTGTGAGCGTAGCCCTCCTGCTCTGCATCCCCATGCTAATGGTAATGTGACCATGGTGGGTGTTGGTGtcaagctggaggaggaggagtctgGAGAAGGAGGCGGAGTCAGAGAGCGTGAGTCACGTCAATCTTCGCCCTCTTCTGCCTGGTCGGTGCGTCAACCAATCGAACGAGGGGATGATGAAAAGCCTACATCCCTCATCTCTCGATCTCCTTTGGCAAGTTCTCCCAGTAAAGAGAGGCCACACACCCTCAGTCCTTCCAGTCTGGATGGAGTGAACAGAGCCCAGGACAGGCCTGAAGCCCAGCCCAACGTCAGCGAGGTTCTGCCCACCATCGAGAAACTGCTGAATGCAGACTGGAGAGAAAAGATTTTGGGAAAAGGATTCCAGAGCACTGCTAATGTCAAAGgcacTCAGGAGAGCCTGGCTGAGAAGGAGCTGCAGCTGTTGCTGATGATTAACCAGTTGTCTGGGTTGAGGGAGCAGTTGCTGGGAGCACACTCGGAGCAGAGGAACATGGCTGCTCTGCtgctggagaaacagcagcagcagatggaGCTGGCACGGCAGCAACAGGAACAGATTgccaaacagcagcagcagctaataCAGCAGCAGCATAAGATCAACCTTCTACAGCAGCAGATCCAGCAGGTGAACTTGCCCTATGTGATGATACCTGCCTTCCACCCCAACACACAGCCACTGCCCGTGTCCACTGAAGCACAGATGGGCCTGCCCCTTCAGCCTATTCCCTGTAAGCCAGTTGAATATCCCATGCAGCTACTCCCGAACCCCCACTCCACGCCTGTCAAAAGATCCAGCGGTACAGTCTTTCGACAGGAGAGCACTCAGCCCCTGAACCTCACAGCTAAACCCAAGACCCCCAGCCCACAGACTCTGGAGCTGACCTCTGCCCACCTGCAGCCCAGCTACAGGCCCAGAGAGCTGTCCCACAGCCCCCCCAGACCTTCGCTTAGCCTGGGCTTCTTGGGTGAGGGGGACGTTGTGACCCAAGCCATCCACGATGCCCAGCAGCTGTTGCGTGGAGGCCAGGGCCCAGCGGGCCGAGAAAGGGACCGGGATAGGGACAGTAGCACGAGGCTGAGCGACTATAATAAGGAGGTGTCCCGAGCTGACCGGCTGTCTCACATGGACCGCAGTGAAGATGGACAGTCAATGAGAACGAACGAGGAGCACCTCAGCAGTGATTCTGAAGGGCAGATCACAGTTCCTGGAGTGGGGGGCTACAGTGACAGCCGGACCACCTCTTCTGGGCATATCAAGAGGCCCATGAACGCGTTCATGGTGTGGGCCAAAGACGAGCGCCGCCGAATCCTGCAGGCTTTTCCCGACATGCACAACTCCAGCATCAGCAAGATCCTGGGCTCACGCTGGAAGTCCATGTCCAACCAGGAGAAGCAGCCGTACTATGAGGAGCAGGCCAGGCTGAGCCGGCAGCATCTGGAGCGCTATCCCGACTACAAATACAAACCCCGGCCCAAGCGCACCTGCATCGTAGAGGGCAGGCGGCTGCGCGTGGGCGAGTATAAGGCCATGATGAAGAGCCGGAGACAGGAGCAGCGCGCCTCATACCCACCCAGccaatcagagcagcaACTGCATTACCCCTCAGCTGAGGGTCAGTACCCCAGCACTCCGGTCTCCATGGCCCTCCCCCTGCACcctgcactgctggagcactaCCTGCCCCGTCCCCTGGAGCCCCCGCAGGGCCGAGGCCACGACGAGCCGGAAGCCAGAGCCAAGCAGCCTTACAGCGAGGGAGAGGACAGCGACGGAGGAGAGCGGAGCGAGGGGGAGCTGGTGGTCCTCACTGACTGAGAGAGAGGGGACAGGGAGGAATTTCTGTACATGCAGTGAGGAAACTTTGGGGTGTGGGGGGTCAGTGGGGGTTATTTTGAAGTGGTTCAGTTTGAGGGTCTCGGAGAAGTGCAGCTTTGCGTTACATAGACTATATGTTATTTTACTCCAGCAGCGATGTCTGATGTTCAGGGAAGTTGTAGTTAGTTGAGAAGCCTGACCAAAGCCTAATAAATCAAGGTttggttttactgtgtttttataatCTAACGTTCACACGCTTCTATTGTTGACCATAATTCATGGCAAGCTCTTgagactttttattttaagaccTTCATTTAGAGGGCTTTAAAATGCAGAATACCATCATATTtcttgtgtttatttctgtcaAAGGGATAAATGTGAAACCGTTGGGAATCAGACTTAATGGTAATGGACTATAAAGCAATTCAGGCAGCCAAATAATACTGCATTAAGAAAAGGTCACTGTTCTATAGTTCTATTAGTTTTATTGGATCTTATTCACGTGAC
>XM_022682317.1
TTAAGACCTCAATGTACTCAGGCCTTGGTAAACAGACAGTATGTCATTGTGTCTAGTGATGTGTGATTTTAACAACCTGTTCCTTTTTTGTGCTCTCCAAAAAATGCACAAACTTTAGTTTTGATAGCATACTTGCACTGTAATTTCTGCATTTGTTGTAATTGTATTTAATGTCGTTGTGACGGACTtttgaaaagttattttcagTATAAAAGAGCAAAGAATAAGGGAAAACCCAccccaccctcagctcaaactTTGTGATTTGCAGTTGcactaattttaaaatgaactcaAAATGGTCAGAAGATACATTTTGGGAATATATGGTTTCCTCATTTGATGAATTTGGAAAGTGctgtcaaagtttttttttctcacaaccCACATGTTCCCAAACACTCGGCCTCCGCTGCCACCTACTATATCTCCCCACAGTTGAGTGACACGAAGGCAGACCCGCAGCGGAAATCAGACAGCCTGCCATAAGAATAGAGCTCATTGAGTAGCTGCAGAAAAGGTGAACAAATAGGCAGCTGCCAAACTAACCCATCGCTATTGTCCCGCTGTCAACAGAAAGGTATCTGCATTAGAATGTGTGAGCGTAGCCCTCCTGCTCTGCATCCCCATGCTAATGGTAATGTGACCATGGTGGGTGTTGGTGtcaagctggaggaggaggagtctgGAGAAGGAGGCGGAGTCAGAGAGCGTGAGTCACGTCAATCTTCGCCCTCTTCTGCCTGGTCGGTGCGTCAACCAATCGAACGAGGGGATGATGAAAAGCCTACATCCCTCATCTCTCGATCTCCTTTGGCAAGTTCTCCCAGTAAAGAGAGGCCACACACCCTCAGTCCTTCCAGTCTGGATGGAGTGAACAGAGCCCAGGACAGGCCTGAAGCCCAGCCCAACGTCAGCGAGGTTCTGCCCACCATCGAGAAACTGCTGAATGCAGACTGGAGAGAAAAGATTTTGGGAAAAGGATTCCAGAGCACTGCTAATGTCAAAGgcacTCAGGAGAGCCTGGCTGAGAAGGAGCTGCAGCTGTTGCTGATGATTAACCAGTTGTCTGGGTTGAGGGAGCAGTTGCTGGGAGCACACTCGGAGCAGAGGAACATGGCTGCTCTGCtgctggagaaacagcagcagcagatggaGCTGGCACGGCAGCAACAGGAACAGATTgccaaacagcagcagcagctaataCAGCAGCAGCATAAGATCAACCTTCTACAGCAGCAGATCCAGCAGGTGAACTTGCCCTATGTGATGATACCTGCCTTCCACCCCAACACACAGCCACTGCCCGTGTCCACTGAAGCACAGATGGGCCTGCCCCTTCAGCCTATTCCCTGTAAGCCAGTTGAATATCCCATGCAGCTACTCCCGAACCCCCACTCCACGCCTGTCAAAAGATCCAGCGGTACAGTCTTTCGACAGGAGAGCACTCAGCCCCTGAACCTCACAGCTAAACCCAAGACCCCCAGCCCACAGACTCTGGAGCTGACCTCTGCCCACCTGCAGCCCAGCTACAGGCCCAGAGAGCTGTCCCACAGCCCCCCCAGACCTTCGCTTAGCCTGGGCTTCTTGGGTGAGGGGGACGTTGTGACCCAAGCCATCCACGATGCCCAGCAGCTGTTGCGTGGAGGCCAGGGCCCAGCGGGCCGAGAAAGGGACCGGGATAGGGACAGTAGCACGAGGCTGAGCGACTATAATAAGGAGGTGTCCCGAGCTGACCGGCTGTCTCACATGGACCGCAGTGAAGATGGACAGTCAATGAGAACGAACGAGGAGCACCTCAGCAGTGATTCTGAAGGGCAGATCACAGTTCCTGGAGTGGGGGGCTACAGTGACAGCCGGACCACCTCTTCTGGGCATATCAAGAGGCCCATGAACGCGTTCATGGTGTGGGCCAAAGACGAGCGCCGCCGAATCCTGCAGGCTTTTCCCGACATGCACAACTCCAGCATCAGCAAGATCCTGGGCTCACGCTGGAAGTCCATGTCCAACCAGGAGAAGCAGCCGTACTATGAGGAGCAGGCCAGGCTGAGCCGGCAGCATCTGGAGCGCTATCCCGACTACAAATACAAACCCCGGCCCAAGCGCACCTGCATCGTAGAGGGCAGGCGGCTGCGCGTGGGCGAGTATAAGGCCATGATGAAGAGCCGGAGACAGGAGCAGCGCGCCTCATACCCACCCAGccaatcagagcagcaACTGCATTACCCCTCAGCTGAGGGTCAGTACCCCAGCACTCCGGTCTCCATGGCCCTCCCCCTGCACcctgcactgctggagcactaCCTGCCCCGTCCCCTGGAGCCCCCGCAGGGCCGAGGCCACGACGAGCCGGAAGCCAGAGCCAAGCAGCCTTACAGCGAGGGAGAGGACAGCGACGGAGGAGAGCGGAGCGAGGGGGAGCTGGTGGTCCTCACTGACTGAGAGAGAGGGGACAGGGAGGAATTTCTGTACATGCAGTGAGGAAACTTTGGGGTGTGGGGGGTCAGTGGGGGTTATTTTGAAGTGGTTCAGTTTGAGGGTCTCGGAGAAGTGCAGCTTTGCGTTACATAGACTATATGTTATTTTACTCCAGCAGCGATGTCTGATGTTCAGGGAAGTTGTAGTTAGTTGAGAAGCCTGACCAAAGCCTAATAAATCAAGGTttggttttactgtgtttttataatCTAACGTTCACACGCTTCTATTGTTGACCATAATTCATGGCAAGCTCTTgagactttttattttaagaccTTCATTTAGAGGGCTTTAAAATGCAGAATACCATCATATTtcttgtgtttatttctgtcaAAGGGATAAATGTGAAACCGTTGGGAATCAGACTTAATGGTAATGGACTATAAAGCAATTCAGGCAGCCAAATAATACTGCATTAAGAAAAGGTCACTGTTCTATAGTTCTATTAGTTTTATTGGATCTTATTCACGTGAC
>XM_022682318.1
GGCCCAGGTTACAGCATGACTTGCTCCACCAGCTTCCAGCACCACCACATATCTGCACTGCGTCTGCAAGACAAGCCATGGGCCGTGAGAGCCGCCTGCGGATTCTTGAGAATGTGTGAGCGTAGCCCTCCTGCTCTGCATCCCCATGCTAATGGTAATGTGACCATGGTGGGTGTTGGTGtcaagctggaggaggaggagtctgGAGAAGGAGGCGGAGTCAGAGAGCGTGAGTCACGTCAATCTTCGCCCTCTTCTGCCTGGTCGGTGCGTCAACCAATCGAACGAGGGGATGATGAAAAGCCTACATCCCTCATCTCTCGATCTCCTTTGGCAAGTTCTCCCAGTAAAGAGAGGCCACACACCCTCAGTCCTTCCAGTCTGGATGGAGTGAACAGAGCCCAGGACAGGCCTGAAGCCCAGCCCAACGTCAGCGAGGTTCTGCCCACCATCGAGAAACTGCTGAATGCAGACTGGAGAGAAAAGATTTTGGGAAAAGGATTCCAGAGCACTGCTAATGTCAAAGgcacTCAGGAGAGCCTGGCTGAGAAGGAGCTGCAGCTGTTGCTGATGATTAACCAGTTGTCTGGGTTGAGGGAGCAGTTGCTGGGAGCACACTCGGAGCAGAGGAACATGGCTGCTCTGCtgctggagaaacagcagcagcagatggaGCTGGCACGGCAGCAACAGGAACAGATTgccaaacagcagcagcagctaataCAGCAGCAGCATAAGATCAACCTTCTACAGCAGCAGATCCAGCAGGTGAACTTGCCCTATGTGATGATACCTGCCTTCCACCCCAACACACAGCCACTGCCCGTGTCCACTGAAGCACAGATGGGCCTGCCCCTTCAGCCTATTCCCTGTAAGCCAGGCTTCTTGGGTGAGGGGGACGTTGTGACCCAAGCCATCCACGATGCCCAGCAGCTGTTGCGTGGAGGCCAGGGCCCAGCGGGCCGAGAAAGGGACCGGGATAGGGACAGTAGCACGAGGCTGAGCGACTATAATAAGGAGGTGTCCCGAGCTGACCGGCTGTCTCACATGGACCGCAGTGAAGATGGACAGTCAATGAGAACGAACGAGGAGCACCTCAGCAGTGATTCTGAAGGGCAGATCACAGTTCCTGGAGTGGGGGGCTACAGTGACAGCCGGACCACCTCTTCTGGGCATATCAAGAGGCCCATGAACGCGTTCATGGTGTGGGCCAAAGACGAGCGCCGCCGAATCCTGCAGGCTTTTCCCGACATGCACAACTCCAGCATCAGCAAGATCCTGGGCTCACGCTGGAAGTCCATGTCCAACCAGGAGAAGCAGCCGTACTATGAGGAGCAGGCCAGGCTGAGCCGGCAGCATCTGGAGCGCTATCCCGACTACAAATACAAACCCCGGCCCAAGCGCACCTGCATCGTAGAGGGCAGGCGGCTGCGCGTGGGCGAGTATAAGGCCATGATGAAGAGCCGGAGACAGGAGCAGCGCGCCTCATACCCACCCAGccaatcagagcagcaACTGCATTACCCCTCAGCTGAGGGTCAGTACCCCAGCACTCCGGTCTCCATGGCCCTCCCCCTGCACcctgcactgctggagcactaCCTGCCCCGTCCCCTGGAGCCCCCGCAGGGCCGAGGCCACGACGAGCCGGAAGCCAGAGCCAAGCAGCCTTACAGCGAGGGAGAGGACAGCGACGGAGGAGAGCGGAGCGAGGGGGAGCTGGTGGTCCTCACTGACTGAGAGAGAGGGGACAGGGAGGAATTTCTGTACATGCAGTGAGGAAACTTTGGGGTGTGGGGGGTCAGTGGGGGTTATTTTGAAGTGGTTCAGTTTGAGGGTCTCGGAGAAGTGCAGCTTTGCGTTACATAGACTATATGTTATTTTACTCCAGCAGCGATGTCTGATGTTCAGGGAAGTTGTAGTTAGTTGAGAAGCCTGACCAAAGCCTAATAAATCAAGGTttggttttactgtgtttttataatCTAACGTTCACACGCTTCTATTGTTGACCATAATTCATGGCAAGCTCTTgagactttttattttaagaccTTCATTTAGAGGGCTTTAAAATGCAGAATACCATCATATTtcttgtgtttatttctgtcaAAGGGATAAATGTGAAACCGTTGGGAATCAGACTTAATGGTAATGGACTATAAAGCAATTCAGGCAGCCAAATAATACTGCATTAAGAAAAGGTCACTGTTCTATAGTTCTATTAGTTTTATTGGATCTTATTCACGTGAC

Function

symbol description
sox13 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell fate commitment and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be active in nucleus. Is expressed in several structures, including central nervous system; forebrain neural keel; hindbrain neural plate; neural rod; and solid lens vesicle. Orthologous to human SOX13 (SRY-box transcription factor 13).

NR:

description
PREDICTED: transcription factor SOX-13 isoform X2

GO: NA

KEGG:

id description
K09269 SOX5_6_13; transcription factor SOX5/6/13 (SOX group D)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682312.1 False 2478 mRNA 0.55 14 6897991 6931357
XM_022682313.1 False 2475 mRNA 0.55 14 6897991 6931357
XM_022682314.1 False 2469 mRNA 0.55 14 6897991 6931357
XM_022682315.1 False 2517 mRNA 0.54 14 6897991 6930479
XM_022682316.1 False 2600 mRNA 0.54 14 6897991 6948954
XM_022682317.1 True 2961 mRNA 0.52 14 6897991 6944188
XM_022682318.1 False 2259 mRNA 0.54 12 6897991 6931357

Neighbor

gene id symbol gene type direction distance location
LOC103022878 NA coding downstream 69280 6812408 ~ 6828711 (-)
cdk18 cdk18,si:dkey-166c18.1,LOC108254840,LOC107654374,LOC107756627,LOC107698687 coding downstream 395595 6395390 ~ 6502396 (-)
LOC103042703 LOC103042703,LOC108437606 coding downstream 519227 6339628 ~ 6378764 (-)
LOC103023821 epha8,LOC107565732,LOC107756634,LOC107654383,LOC107582396 coding downstream 821277 5917506 ~ 6076714 (-)
c22h1orf50 cunh1orf50,zgc:112255,LOC107654415,LOC107654365,LOC107565729,LOC107582467,LOC107756638,LOC107751182 coding downstream 1121846 5771810 ~ 5776145 (-)
kif17 kif17,LOC108438632 coding upstream 58493 7007447 ~ 7031027 (-)
sh2d5 sh2d5 coding upstream 84150 7033104 ~ 7050301 (-)
hp1bp3 hp1bp3 coding upstream 104272 7053226 ~ 7066086 (-)
LOC103037403 NA coding upstream 248246 7197200 ~ 7205391 (-)
LOC103036072 phactr3,LOC108254891 coding upstream 280519 7229473 ~ 7343221 (-)
G187787 NA non-coding downstream 11894 6885187 ~ 6886097 (-)
G187766 NA non-coding downstream 96543 6775168 ~ 6801448 (-)
G187764 NA non-coding downstream 138089 6759507 ~ 6759902 (-)
G187763 NA non-coding downstream 139389 6758142 ~ 6758602 (-)
G187745 NA non-coding downstream 342114 6555315 ~ 6555877 (-)
G187794 NA non-coding upstream 42010 6990964 ~ 6997859 (-)
LOC111195364 NA non-coding upstream 157246 7106200 ~ 7130779 (-)
G187875 NA non-coding upstream 204129 7153083 ~ 7155349 (-)
G187878 NA non-coding upstream 234872 7183826 ~ 7184053 (-)
G187880 NA non-coding upstream 238836 7187790 ~ 7188038 (-)
svbp svbp other downstream 1375070 5518793 ~ 5522921 (-)
phf13 phf13 other downstream 1392244 5493412 ~ 5505747 (-)
vamp3 vamp3,LOC107582408,LOC107751179 other downstream 1908733 4974228 ~ 4989258 (-)
LOC103030666 kcnab2a,LOC108431628,LOC107712982,LOC107657983,LOC107582417,LOC107592856,LOC108255041,LOC103385628,LOC101463812,LOC108231619,LOC107385277,LOC106513833,LOC100709904 other downstream 2737037 3970934 ~ 4160954 (-)
LOC107197677 NA other downstream 3118271 3778014 ~ 3779720 (-)
LOC111195363 snrpe other upstream 28697 6977651 ~ 6982840 (-)
pdrg1 pdrg1 other upstream 239662 7188616 ~ 7193252 (-)
G187946 mybl2,mybl2b other upstream 439443 7388397 ~ 7391026 (-)
ghrh ghrh,LOC103034597,LOC108438619 other upstream 460168 7409122 ~ 7419806 (-)
LOC111195437 NA other upstream 3002130 9951084 ~ 9956317 (-)

Expression


Co-expression Network