G76419


Basic Information

Item Value
gene id G76419
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 12717772 ~ 12718003 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU87185
TATTAGTTGTGTTTGAGTCCCTCAGTTGTCCTCAGTGTGAAAAGACGGATCTCAAAATCATTCAGTCACTGCCGTAAAGGGTTCAAATATGCAAAAAATGCTGGAAAACTGAAGAATCTGCAGGACCTGGAGAATTTTTCTGAAGAACAGAGCTCAGTTTAACTGCTCAGGACAAACAAGGGACTCATAAACAACCATCACAAAACAAATAAACAGTCATAGATCATTCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87185 True 232 lncRNA 0.39 1 12717772 12718003

Neighbor

gene id symbol gene type direction distance location
CI01000012_12695280_12699262 RHOUA coding upstream 18346 12695280 ~ 12699426 (+)
CI01000012_12686685_12690637 TBP coding upstream 26605 12686685 ~ 12691167 (+)
CI01000012_12667656_12672197 NA coding upstream 45525 12667656 ~ 12672247 (+)
CI01000012_12653960_12664480 SLC1A4 coding upstream 52651 12653831 ~ 12665121 (+)
CI01000012_12621489_12646263 NA coding upstream 71373 12621338 ~ 12646399 (+)
CI01000012_12733327_12736780 RAB4A coding downstream 15324 12733327 ~ 12737269 (+)
CI01000012_12761469_12776431 URB2 coding downstream 43466 12761469 ~ 12776470 (+)
CI01000012_12832011_12865894 GALT2, GALNT2 coding downstream 114008 12832011 ~ 12865894 (+)
CI01000012_12892163_12901139 COG2 coding downstream 174160 12892163 ~ 12901715 (+)
CI01000012_12930929_12947409 PHACTR2 coding downstream 212926 12930929 ~ 12947409 (+)
G76418 NA non-coding upstream 100 12717464 ~ 12717672 (+)
G76384 NA non-coding upstream 32305 12685189 ~ 12685467 (+)
G76391 NA non-coding upstream 33864 12682731 ~ 12683908 (+)
G76371 NA non-coding upstream 87020 12630517 ~ 12630752 (+)
G76369 NA non-coding upstream 90167 12627384 ~ 12627605 (+)
G76374 NA non-coding downstream 28758 12745531 ~ 12749169 (+)
G76372 NA non-coding downstream 184083 12902086 ~ 12903289 (+)
G76434 NA non-coding downstream 190996 12908999 ~ 12909507 (+)
G76436 NA non-coding downstream 235563 12953566 ~ 12953765 (+)
G76437 NA non-coding downstream 236445 12954448 ~ 12955634 (+)
G76385 NA other upstream 42106 12630755 ~ 12675666 (+)
G75533 NA other upstream 1572033 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 2493485 10223697 ~ 10236276 (+)
G73578 NA other upstream 4350145 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 4909917 7805248 ~ 7811902 (+)
CI01000012_13029637_13033226 RGS17 other downstream 297503 13029435 ~ 13038899 (+)
G76645 NA other downstream 933856 13651859 ~ 13652234 (+)
G76656 NA other downstream 985484 13703487 ~ 13739731 (+)

Expression


Co-expression Network