CI01000013_05927503_05928295


Basic Information

Item Value
gene id CI01000013_05927503_05928295
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 5927231 ~ 5928559 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_05927503_05928295.mRNA
ATTTAAATGCAGATAAATTTGTATGTTCATGTTTGCCACGCGCTTAAAATTTTGGAGAAAAATGAAATCCAAAACAAGTAAAAAAATTCTGACTTCCGCTTCTAAATAGTAGCACAGTTTTCATGAATGCAAATATGTCCAAAATCAGAATTATTGCTCTGCTGCAAATAGTTTTTCGTATTATGACGTAATTGTTGTGAGAATCATTTTGTTTATATGAGATGCAATAATGGGCATATGCAATTCCAGTGCACTCGAGGACGCTTGTGTACATGGCCAGTGAATCCTGGCTGGAGTCTTCCCTGCGCCGTTCATCTAAACTCGGGCAGGAGGTGTTGGAAAAGGCAAAAAGACGGTCTGTTAGCTGCTCAAGTGCAAGACCAAGACCTTCACCCATGTTCAATCACTATGAGAGTGACTCAGAAAGAGACGTTTCCCATTCAAACTTGGACCATGCTTTTGCTACAATAGTGGAGTACATGTCTGAGACTACAAGACAGTGCCAGAAGTTTTATAAGACTGTGCACCTGGCTCAGCCCAGTGAGCGAGAACACATCTGTCGCTACCATTCACAGCAGATGTTGAGGACTGCAGCCATCAAACGAGACATTGGTTCATCAGAACCAGAGGATTTTCTTATCGAAGTGTCTCCAGGAACCTATTCCATCACAGCAGCAATGCAAGACACAAGACCAGAGACGAAAACTGTCCACATCGACGCAGGAGAAAGCATAAGCCTTACATTCAACCTCTGAACTTGAACCTGTATATGAGTGAAATTCAATGCCTTAATTGAGGACTTGCACTGAAATATTAAATGCACTGACTCTTCTTGATTTATCTTTGTGTGTTCATAAGTGTTATTGTTTAATACTCAGGAATATTTATTTTGGCTATTCATTTTTATAGTAATCATGAATTTATAATGAGGCATAAAAGCCATAATGAGATTTTACAGCAAGACAAAAATGTACATGTAATTTCACTTTATTTATACCTCTTACAGACGTTTCATTTTA

Function

NR:

description
Si:dkey-8l13.1 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_05927503_05928295.mRNA True 1019 mRNA 0.39 4 5927231 5928559

Neighbor

gene id symbol gene type direction distance location
CI01000013_05885911_05904644 TPH2, TBC1D15 coding upstream 22081 5885911 ~ 5905150 (+)
CI01000013_05878375_05880680 HAS3 coding upstream 45859 5878375 ~ 5881372 (+)
CI01000013_05851074_05870330 TANGO6 coding upstream 56361 5851074 ~ 5870870 (+)
CI01000013_05847899_05849819 NA coding upstream 77037 5847899 ~ 5850194 (+)
CI01000013_05808968_05845757 NA coding upstream 80713 5808968 ~ 5846518 (+)
CI01000013_05939966_05944534 ZNF143B, ZNF143 coding downstream 11407 5939966 ~ 5944658 (+)
CI01000013_05947579_05951579 WEE1 coding downstream 19020 5947579 ~ 5952609 (+)
CI01000013_05953069_05974101 SWAP70B, SWAP70 coding downstream 24510 5953069 ~ 5974851 (+)
CI01000013_06025196_06025887 NA coding downstream 96144 6024703 ~ 6026840 (+)
CI01000013_06038814_06043689 NA coding downstream 110255 6038814 ~ 6045236 (+)
G81630 NA non-coding upstream 134530 5792238 ~ 5792701 (+)
G81628 NA non-coding upstream 136536 5779007 ~ 5790695 (+)
G81616 NA non-coding upstream 158246 5768785 ~ 5768985 (+)
G81615 NA non-coding upstream 158725 5768299 ~ 5768506 (+)
G81608 NA non-coding upstream 165667 5761359 ~ 5761564 (+)
CI01000013_06050285_06059640 NA non-coding downstream 100050 6049864 ~ 6060269 (+)
G81679 NA non-coding downstream 101633 6030192 ~ 6032642 (+)
CI01000013_06076169_06080164 NA non-coding downstream 150003 6075400 ~ 6081684 (+)
G81672 NA non-coding downstream 154915 6083474 ~ 6084895 (+)
G80845 NA other upstream 1090999 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 1861402 4050837 ~ 4065829 (+)
G80062 NA other upstream 2342447 3584008 ~ 3584784 (+)
G79309 NA other upstream 3460060 2466765 ~ 2467171 (+)
G77695 NA other upstream 4974262 946521 ~ 952969 (+)
G81994 NA other downstream 1407386 7335945 ~ 7338239 (+)
G82168 NA other downstream 2099779 8028338 ~ 8041343 (+)
G82581 NA other downstream 3400770 9329329 ~ 9334948 (+)

Expression


Co-expression Network