G85402



Basic Information


Item Value
gene id G85402
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 11036996 ~ 11037234 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU97194
GCACGATTTGCGGAGGGGGATCTACAAATTTTCCAAAAAGTTTGTGAAGATGGTTGCCACATATTGCGTTCCCAAATGCACGATATAAGCAACCCACATTCACAGCAGATGCAGAGATGAGTAAAAGAACACAGTGCAGCGCTTCACTCTGAAACATGCAACGCATTTAATTATTTGATTTATAAATTGCAGCCTTTGCATTTCGGCTATGATTTCCATTAATCATGCAGCTCTACATC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU97194 True 239 lncRNA 0.41 1 11036996 11037234

Neighbor


gene id symbol gene type direction distance location
CI01000013_10892125_10899628 ARSA coding downstream 137368 10891714 ~ 10899628 (-)
CI01000013_10843295_10852581 CHKB coding downstream 184415 10843160 ~ 10852581 (-)
CI01000013_10838711_10841053 NA coding downstream 195432 10838497 ~ 10841564 (-)
CI01000013_10828622_10836409 CPT1, CPT1B coding downstream 199850 10828531 ~ 10837146 (-)
CI01000013_10799938_10806858 PRPF18 coding downstream 230138 10798598 ~ 10806858 (-)
CI01000013_11262983_11266454 RABL2B coding upstream 225241 11262475 ~ 11266454 (-)
CI01000013_11276658_11278225 NA coding upstream 239400 11276634 ~ 11278730 (-)
CI01000013_11280259_11284882 NA coding upstream 242950 11280184 ~ 11284882 (-)
CI01000013_11308893_11311699 ARF4A, ARF5, ARF4 coding upstream 270561 11307795 ~ 11311699 (-)
CI01000013_11343431_11351259 NA coding upstream 305339 11342573 ~ 11351811 (-)
G85400 NA non-coding downstream 2159 11034519 ~ 11034837 (-)
G85399 NA non-coding downstream 2569 11034151 ~ 11034427 (-)
G85398 NA non-coding downstream 4405 11032238 ~ 11032591 (-)
G85397 NA non-coding downstream 6765 11029997 ~ 11030231 (-)
G85396 NA non-coding downstream 8909 11027792 ~ 11028087 (-)
G85403 NA non-coding upstream 899 11038133 ~ 11038375 (-)
G85404 NA non-coding upstream 2830 11040064 ~ 11040316 (-)
G85406 NA non-coding upstream 5183 11042417 ~ 11042791 (-)
G85429 NA non-coding upstream 43099 11080333 ~ 11080593 (-)
G85430 NA non-coding upstream 45414 11082648 ~ 11083038 (-)
G85401 NA other downstream 1530 11035032 ~ 11035466 (-)
G85188 NA other downstream 441659 10592204 ~ 10595337 (-)
CI01000013_10564288_10569141 NA other downstream 464556 10563459 ~ 10569290 (-)
G85170 NA other downstream 556296 10479861 ~ 10480700 (-)
CI01000013_09309438_09335834 MICAL3A other downstream 1714152 9307036 ~ 9336077 (-)
CI01000013_11596784_11604320 NA other upstream 561826 11596688 ~ 11604865 (-)

Expression



Co-expression Network