CI01000014_00852874_00874645


Basic Information

Item Value
gene id CI01000014_00852874_00874645
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000014
NCBI id null
chromosome length 1317303
location 852515 ~ 874736 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000014_00852874_00874645.mRNA
ACGTGAGATGAGTCTGTCTCCTCCCATCTGTGTCTGAAAATAAAGCCTCGCTCTCCTCTGAAGGATTTGTCGCAGATGTGCTGCGACTGCCATGAACTCTCCAGACTACGATGACAGCACCGCGTTCCTGGGAGACTGGGGACCTTTCCAAAGGACGGTGTTCACTCTTTTGTGTTTGAGCATTATTCCCAATGGCTTCACGGGGTTATCCATGGTGTTCATGGGCGATACACCCGCTCATCACTGTCTCATTCCCGCGGCTCTGAACATCACTGATGAATGGAGAAACGCGTCTATTCCTCTGGATGAGGACGAGGATTCTCGACTCACTAAATGCTCAAGACACCGAGTGGACATCGTGAAGAACTATTCGGACAGAGGTTTGCTCCCGTGGGTGGATGTGAATGTCTCGTCTATTCCTCGAGAAGCCTGTATGGACGGCTGGGAGTATGATAAAGGAACGTACATCTCCACGATTGTTACAGAGTGGGATTTGGTGTGTTCAGATGACTGGAGAGCTCCATTGACCACCTCACTCTTCTTCTGTGGTGTTCTGATTGGTTCTGTCATCTCTGGACAGATGTCTGACAGGTTTGGCAGGAAAATAGTGCTGTTTGTAACCATGGGGATTCAGACGGTATTCACCTTCATTCAAGTCTTCTCCCCATCTTGGTTGATTTTTTGCTTGTTGTTTTTCATTGTTGGAATGGGCCAGATTTCAAACTATGTTGCAGCATTTGTTTTAGGAATGGAAATATTGAGCCCATCCATTCGTGACCTCTACTCCACTCTTGGTGTGTGTCTTTTCTTTTCAATGGGGTATATGATGCTTCCGCTGACTGCCTACTTTCTGCGAGACTGGAGAACACTGCTGCTGGCCCTCACCGTTCCTGGATTATTCTGCATACCCCTTTGGTGGTTTATTCCAGAGTCTCCGCGATGGCTGTTGTCTCAGGGGAGGGTTGACGAGGCAGAGGCAATTCTGAGAAAGGCTGCCAAAATGAACGGGGTTAAAGCCCCTGATGTCATTTTTCCCCTGCATCAGTCAAGGGAAAACGCTGGAAGGCTGCAGACCTACGGTCTCTGTGACCTGGTGAAGTCCAGCAACATCCGCTGCATTACTGTCCTGCTGTGCCTGGTCTGGTCGGCTGTTTCAATCGGATACTGTGCCTTGTCTCTGAACACATCCAGTCTGCATGGGAACATCTACCTGAACTGCCTCCTGTCAGCAGTAGTGGAAGTGCCTGCGCTCATCATGGCCTGGCTGATGCTCCGACACTGGCCACGCCGCCTCTGCTTGTCCTCTACCCTGTCATTAGGAGGACTGGTTCTTCTCTTCATACACCTCATACCACAACATATGAGCTCTGTTGCCATTTCTCTGGTGATGCTGGGAAAGTTCGGCCTGTCAGCAGCATTTGCGATCGTGTACCCAGCGACTGCAGAGCTGTACCCCACCATTCTGAGGAACACGGCTTTAGGAACCTGCTCCATGGCATCCAGAGTCGGCAGCATTTCTGCACCATACTTCATCTACTTAGGAGGCTACTACAAGTCTTTGCCGTACATCTTAATCGGCAGTCTGAATGTTCTCTCCGGGTTGCTCTACCTTCTGCTTCCAGAGAGTCTGGGATCACCTTTACCAGAGACTATCAGTCACATGCAGACAGTAGTTTGGTCTAAAAAAAGACGTTTTACTTACAGTCCAACCAACAAGAAGAGAAAACTAGTAAAATGCAGAAAAGTGACGTTCAGTGATATTGTGAGGGTTCGAAACGTGTCAAGCCATAAACATGATAAGACAGAGCAGCAGGACGAGCGGGTTCAGCCAGACGGAAGTGCGTCAGAGGAATCCTCAGATATTCCCTCAGGGCCTGTGAGGTTCTTTGACTTTGCAGATGAGTTTGATAGAGAATCCTTTTTCCACAGACTGAAACAAACACCCTCGTTTACGTTTCCTGCCAAACCGGTAACTCTTTTCCTTATTCCCCATAGAGACACTTTTGACACTGAACGGGGATTCGTGATCCTTTCGGCATGTTTTTCTGTTCTTTATAGATCCTCTCCACCATCTGAGAGGACTTCAGCACAAGTGGAGTTTGATCGGGAGTTCAGGAGCAAATCTGACCAGCAGAGGGCGACTCAGACTCGCAGTGAACAGCGTTAGATTTCTACACATATTTTATCTGAATATAATGCCCATGCAGTGTTTTTGGCTTTGCTGTGCTCCTGAAGACCTCAAGAGAGATGAATATGTATTTATCTGGGTCAGACTGTTCAAGAAAACATAAAGGGATGATTAATATACAACTTGTCCTCTTATGGAACATACCTATGTGAAATGAAGTCGAGTTATGAAATCTGTACTTAACTGATGATTTTAATGCAGTACTGAAAATGAGAAGCTAATGATGCCTTGCAGTGCCAGCTGAAGTGGAATTTAATGGGAAGAGAAACTTATAAATGAAATTATTTATATTAGATGTTTATGTGTAAAAGGTTAACAAATACTAAAAGACAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000014_00852874_00874645.mRNA True 2526 mRNA 0.47 11 852515 874736

Neighbor

gene id symbol gene type direction distance location
CI01000014_00821373_00846608 NA coding downstream 4455 821174 ~ 848060 (-)
CI01000014_00775503_00794925 FNIP1 coding downstream 57590 774878 ~ 794925 (-)
CI01000014_00753559_00756594 NA coding downstream 95921 753484 ~ 756594 (-)
CI01000014_00696364_00697192 NA coding downstream 155323 696364 ~ 697192 (-)
CI01000014_00672822_00683285 PPP2CA, PPP2CA.L, PPP2CB coding downstream 168653 672235 ~ 683862 (-)
CI01000014_00880909_00886292 SLC22A4 coding upstream 6005 880741 ~ 886292 (-)
CI01000014_00891730_00895427 NA coding upstream 16941 891677 ~ 895581 (-)
CI01000014_00954505_00954792 NA coding upstream 79705 954441 ~ 955012 (-)
CI01000014_00960029_00966472 FAXDC2 coding upstream 84763 959499 ~ 966472 (-)
CI01000014_01018144_01018740 NA coding upstream 143284 1018020 ~ 1018869 (-)
G86492 NA non-coding downstream 85689 766597 ~ 766826 (-)
G86491 NA non-coding downstream 86579 765457 ~ 765936 (-)
G86483 NA non-coding downstream 93909 758284 ~ 758606 (-)
G86482 NA non-coding downstream 94328 757963 ~ 758187 (-)
G86474 NA non-coding downstream 102937 749077 ~ 749578 (-)
G86498 NA non-coding upstream 2718 877454 ~ 878486 (-)
G86514 NA non-coding upstream 53642 928378 ~ 928687 (-)
G86515 NA non-coding upstream 54973 929709 ~ 929933 (-)
G86528 NA non-coding upstream 107864 982600 ~ 982890 (-)
G86530 NA other upstream 110482 985218 ~ 985744 (-)
G86532 NA other upstream 112808 987544 ~ 988027 (-)

Expression


Co-expression Network