G87355


Basic Information

Item Value
gene id G87355
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 1336299 ~ 1336530 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU99470
TATCCATTGTTTGCATCACATTTCTTCTGAATGATCTGCTCTCCATCATCGTTCTTCAAGAAATGATGCAACCTGAGCAGCGTTTATGTTGTAAAACTGTATATGATCGTATATATGTCACAAACAAATGAGCCCGCGTCCAAAGTATAATTTTTCAAAATGCAGCAGTTTTAGTTATAATATCCAAGCAGTGCTGTCGGAGTTTTATATCCTCCCGCCATTGTCATTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99470 True 232 lncRNA 0.38 1 1336299 1336530

Neighbor

gene id symbol gene type direction distance location
CI01000015_01307849_01327079 SRFA, SRF coding upstream 7923 1306824 ~ 1328376 (+)
CI01000015_01288157_01300925 NA coding upstream 35168 1288157 ~ 1301131 (+)
CI01000015_01080504_01101091 NA coding upstream 234916 1080504 ~ 1101383 (+)
CI01000015_01020856_01025441 HOGA1 coding upstream 310646 1020856 ~ 1025653 (+)
CI01000015_01015968_01016675 NA coding upstream 319453 1015623 ~ 1017700 (+)
CI01000015_01349369_01366864 ZNRF4, RNF13 coding downstream 12839 1349369 ~ 1367511 (+)
CI01000015_01405454_01407722 NA coding downstream 68451 1404981 ~ 1409173 (+)
CI01000015_01412031_01434518 RUBCN coding downstream 75501 1412031 ~ 1434518 (+)
CI01000015_01580548_01582805 TCTEX1D2 coding downstream 244018 1580548 ~ 1583078 (+)
CI01000015_01638133_01646368 HYKK.2, HYKK coding downstream 298896 1635426 ~ 1646409 (+)
G87220 NA non-coding upstream 30389 1302221 ~ 1305910 (+)
G87337 NA non-coding upstream 51022 1278270 ~ 1285277 (+)
G87331 NA non-coding upstream 85333 1250761 ~ 1250966 (+)
G87328 NA non-coding upstream 88694 1246986 ~ 1247605 (+)
G87216 NA non-coding downstream 31684 1368214 ~ 1375675 (+)
G87223 NA non-coding downstream 43151 1379681 ~ 1398822 (+)
G87372 NA non-coding downstream 138580 1475110 ~ 1475479 (+)
G87373 NA non-coding downstream 140839 1477369 ~ 1477960 (+)
G87432 NA other downstream 274553 1611083 ~ 1611387 (+)
G87972 NA other downstream 539474 1876004 ~ 1876594 (+)
G88172 NA other downstream 1047486 2384016 ~ 2526510 (+)
CI01000015_02512276_02523824 NA other downstream 1175568 2511546 ~ 2524572 (+)
CI01000015_03011472_03026518 NA other downstream 1686466 3011472 ~ 3026636 (+)

Expression


Co-expression Network