LOC103041431


Basic Information

Item Value
gene id LOC103041431
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172945.1
NCBI id APWO02000037.1
chromosome length 4505412
location 131229 ~ 146646 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007242163.3
taaataataaactaaataaactaaaaaaatgtaaataaacctaaataaaacagttACAAACTGAATGGGGTGGATAGAAatgaagtttaaaatgatttaaaaacagaatcATCACGAAAAACACGTCATATGTCTAAAGAACAATTCGTCCGCGCATGCGCAGAACGCTTGAGCTGCACAAATTCGACGGCTAGCAGAACTCGACGGAACACCAGGTGTGAACGCCCTACTCCAGCACTATTTAAGCCAGAAGCTCCTGGTCCAAATTCACTGCGAAGACCAGCAGCAAAGCTAGCTCTGCAGCCCCTCCATCACAACACGCAAATATGAAGAACTTCAATCAAGTGTTGGGTGTGTCGTTGCTTATTGTCCTGCTTGGGAAGTCTCTCGGACAAAGCCAAAATCAGGCTTTTAACGATGCTGAGAAACTCCAGCTCCCTCAGTCCTACCAGATCAACTGGATGAGCAACCTGAACGACAATTTTTACCTGTCCCAACTCACCTTACCTGGCACCCACGACACCATGGCACGGTACGGAGGTCCCGCAGTCGACTGCCAGGTCTGGACCTTGGAGGATCAGCTGAAGGCTGGCATTCGCTACCTGGACCTCAGAGCATTCGCCTTTGGAGACTCGCTGCGCCTCATGCACGGGATCGTTTACGAGTTTTCTACTTTTAAAGAGGCCCTGGCCACCATCAAGAAGTTCCTGTCCCAGTACCCAACCGAGACAGTCCTCGTCCGCGTGAAGCCAGAGTTGCTCAACAAAGAGAATGTTCAGGGGTTGGTGGAGCAGGCCATTTACAACGACCAGAACGTGTGGGTGTCCTCCACCGTCCCCACCCTCGGCCAGGTGCGAGGCAAGGTGGTGTTTGTGCAGAAAGATAGCTTCAAGCTGGGTCTCCCTCTGGTGGAAACCGACACCAAGGGAGATTACGAGGTCACCCACATCAAGCAGAAAGAGCAAGAGGTCTCTTCACACCTCAACCAGGCCTTGACCAAGTGTGGAGGATCTTCTATCATTCTGACCTACTCCAGTGGCACGGGCATCGGCACATTCGAGGGCATGTTCCTGACCCCCAAGAGAGTGGCGGAGAAGATCGACCCATGGCTCTACAGTTATCTGGAAGTCTATCTGAATAACGTGCCTGACATCTGCTTCGGTATCATCGCCATGGACTTCCCAGGCCTTGAGCTCATCCAGGCAGTCATCAACTTTAATCTCCAGTTATAGACAGACTCTAAATTGGCTTTTGCACTGTTAAGTAAATGATGATAAGTTTCAGTTTAAAGTGCACGGCCCACcagtaaaaagctaaaaaccTAGTTATTTTGTCTGCATTGATAAAACAAGAAACATTTTCAGGGCACACCTGTTATTGTACTGGATTCCATATTAAAGTCTCAAAAATGAGTTATGCTG

Function

GO: NA

KEGG:

id description
ko00520 Amino sugar and nucleotide sugar metabolism
ko04971 Gastric acid secretion

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007242163.3 True 1421 mRNA 0.48 4 131229 146646

Neighbor

gene id symbol gene type direction distance location
LOC103043481 LOC108433856 coding upstream 123907 63 ~ 7322 (+)
LOC111192126 NA coding downstream 3172 149818 ~ 160837 (+)
LOC111192132 NA coding downstream 44907 191553 ~ 200785 (+)
LOC111192137 NA coding downstream 55641 202287 ~ 210170 (+)
LOC103026183 NA coding downstream 251885 398531 ~ 402803 (+)
LOC103036551 LOC103036551,LOC108433863 coding downstream 682620 829266 ~ 832597 (+)
G340489 lamtor2,LOC107592476,LOC107688283 non-coding upstream 20138 104345 ~ 111091 (+)
G340496 NA non-coding upstream 38196 90533 ~ 93033 (+)
G340578 NA non-coding downstream 179024 325670 ~ 340931 (+)
G340580 LOC108433880,LOC108256188 non-coding downstream 180147 326793 ~ 349692 (+)
G340645 NA non-coding downstream 327204 473850 ~ 474075 (+)
G340647 NA non-coding downstream 353511 500157 ~ 500498 (+)
G340649 NA non-coding downstream 390425 537071 ~ 543455 (+)
G340490 NA other upstream 7560 71821 ~ 123669 (+)
G340488 ubqln4 other upstream 10885 117296 ~ 120344 (+)
mex3a mex3a,LOC107592477,LOC107592188,LOC107756899,LOC107688221 other upstream 42694 51843 ~ 88535 (+)
tmem176b NA other downstream 14922 161568 ~ 183180 (+)
G340657 NA other downstream 478580 625226 ~ 687226 (+)
LOC103029358 fxyd1,plm,LOC108433901,LOC108256298,LOC105891849,LOC107592153,LOC104945886 other downstream 1469712 1616358 ~ 1652511 (+)
LOC103030002 NA other downstream 1514337 1660983 ~ 1665911 (+)
G340904 NA other downstream 1536896 1683542 ~ 1684918 (+)

Expression


Co-expression Network