LOC103043481 (LOC108433856)


Basic Information

Item Value
gene id LOC103043481
gene name LOC108433856
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172945.1
NCBI id APWO02000037.1
chromosome length 4505412
location 63 ~ 7322 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007242170.3
AACGCTAGCGAAGGGCTGCTTCGGGAAGATCTACAAAGAGGACTACAAAGGCAAATGGGCAGCCTTGAAGAAAGTGCCCTCAGGCTTCATCTCCAGGGAACAGCTGGAgagagagtgtaaagtttattACAGAGCACATCACAACAACGTGGTAAAGCTTCTTGGGGATCCGTGGATGCAGGATGGGAAGTGGCACATTCCTCTGGAGTTCATCTTTGGAGAAGATCTGGAGACGACCATTTTTAGTGCACAGAAGTCCAAGATATCGCTCACACCAAAGGTGAAGGCCACCATCATCACAGGAATGTGTGAAGGCTTGTTCCATCTGCACAGCAAAGACATCGTCCACCAGGATCTCAAGCCAGACAACATCATGGTTGAGCATGAAACACACCGCGCTGTGATCATCGACATGGGCCTCGCAAAATTATCAGTGAACGGCTTATCCTCTGCCCAAAACATGGGGAACGAGGCCTACTCTGCTCCTGAGATCCTGCAGGCCAATGGAATCCGGGACAAGCGTTCGGACGCCTGGGCGATGGGAAAAATGGTTGCAGAGCTCATTGCAAGAGTCAGACTGCCTACCACCTTTGTGTCCCCCGTCAAAATCCAAGAGACACTGAAAGACAATCCTTACTGCAGTGTTGTGTCCAAGATGGTGGCTTCCAATCCCATAGAGAGAGCCTCAATGGTCGGGGTGATTTCTGAAATCCGGCGAGCTGGAGTGATTTACGGGGCAGACGTGACACCTAAACCTGGGGCGGGAACAGGATGGGCTAACCCAGGTTTGGGAGCACAAGCAGTTGTCAAAGCAGCACCAGCTCCTGTTGCTGCAGGACCAAACCAGAGAAATCGCCCACCAGCACCATTGGTACACAAAGAACCAGCAGCTGCAATACCGCAGATACGGACCCCGTATCCTGTCAAAGCTGCCCCAGCTCCCGTTAACCCACCTCACATTAACCGTAGCCCATCTCCCAACAATCGTAACCCATATCCCATCCACCGTAGCCCATCTCCCAACAATCGTAACCCATATCCCATCAACCGTAACCCACCTCCCATCAACCGTAGTCCACCTCCCAAAGCAGACGCTCTAGTTCCAATAACCAATGCTGAATTTGCTGCTAAGTTCTCACTGATGTCCCTACCCCCTGACCTGCCACAAGATGGAACTGTGATCCAGCGTCGCTTCGACGGGGATATGCAGCAGCTGCAGTACAAAGAAATAGTCATGAAGGACGGAAAAGTCGTTAAGTATGATGACGTGAGATATATGAAACCGTAGAAGATCAAGAACTTTATAAACAGGATTCCACTTTTTGTGTTTTGGTATCTAAGGTTTTGGTACCAAGACTGAAACCTTGAGTTTTGGATTGATTTTGCAAGCTTTAAAataagccatcagactcttcaaaCACTCTACTgtcctaaaaatgttttattcattatcatttacaatgtaaatgtgtaaaaaaaatgtgactgGGATGGCTTCCACTACCTTCACATGTAATGGATGATGGATATACACCagtggtggatggatggatgaatggatggatggatgtggcCATGATTTTAACATCacttccttgtttctacactcactttGTACTTTGGTTGTAGTTCTGTATCCTTTTCTCGTTTCTATACATACTTTATAATTATCCTCCTAA

Function

NR:

description
PREDICTED: serine/threonine-protein kinase Nek7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007242170.3 True 1679 mRNA 0.47 4 63 7322

Neighbor

gene id symbol gene type direction distance location
LOC103041431 NA coding downstream 123907 131229 ~ 146646 (+)
LOC111192126 NA coding downstream 142496 149818 ~ 160837 (+)
LOC111192132 NA coding downstream 184231 191553 ~ 200785 (+)
LOC111192137 NA coding downstream 194965 202287 ~ 210170 (+)
LOC103026183 NA coding downstream 391209 398531 ~ 402803 (+)
G340496 NA non-coding downstream 83211 90533 ~ 93033 (+)
G340489 lamtor2,LOC107592476,LOC107688283 non-coding downstream 97023 104345 ~ 111091 (+)
G340578 NA non-coding downstream 318348 325670 ~ 340931 (+)
G340580 LOC108433880,LOC108256188 non-coding downstream 319471 326793 ~ 349692 (+)
G340645 NA non-coding downstream 466528 473850 ~ 474075 (+)
mex3a mex3a,LOC107592477,LOC107592188,LOC107756899,LOC107688221 other downstream 44521 51843 ~ 88535 (+)
G340490 NA other downstream 64499 71821 ~ 123669 (+)
G340488 ubqln4 other downstream 109974 117296 ~ 120344 (+)
tmem176b NA other downstream 154246 161568 ~ 183180 (+)
G340657 NA other downstream 617904 625226 ~ 687226 (+)

Expression


Co-expression Network