CI01000019_01173165_01178310


Basic Information

Item Value
gene id CI01000019_01173165_01178310
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000019
NCBI id null
chromosome length 5832599
location 1172544 ~ 1178391 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000019_01173165_01178310.mRNA
ATATAAAAATGCAATCATTCATCTTGTAATTGTGGTCAACAGTGTGCAAACTAATGTAATATAATACACACCTCTCATGGATCTTTGATTATAGAAGCCCCACTGTGAGTATATCAATTAAACTGTCATTAAACCATTGTATATGTATTCCTTTTTTTTCTTCAGTATTTGTATTGTGCTTTACAGAAATGTTAGTTTTGAAACATTTTTAATGGACATTCCCATTCATCTCAAACACACATTTGTTAATGAGACCATATAAAACTGTTTTTCTAGTTTCAGAAAAGCGAGTTAAATTTAGACCCACTGCCAAAGGGTTAGTATTGAGTGCTGGGTGCGGTTTCTGCCCTTCAGGTGGCGCCAGATCTTAAAAAATGACTTCTTGAAGTAGATGAATGAACTGTATTGCTGTATTATAGGGATTTTTTGTTGTTGTTGTTGTTGTTTTCTTTTCTTTTCAAATTATTGTGGACTTTACGTAAAACCCTTATAAAATAATGTATTACTTCTTCAAAACAACGTAGATATATCGCCTGCTTGCTCAGTACACTCGAATATAATTATATTTACGAGAAACTGAAACTGAAAGGATATACGTTATAGGGCGTTTCATTTATGAATATGGCTTCGAACTATCAAGAGGATTCGGATGAAGGCAGCAATCAATCTAGTGAGAGCTGCTCAGAGTTCAGTGACAGTGACACAGACTCTGAGGCAGCCACCGATTCTGACACTGAAGCAGCTGCACAAACATCTGACAAGCGTAATGTTTGTATGCATTACAATCGTGGTAACTGCCGTTTTGGGGACAAGTGTAGGAACGAGCACATATGCAGTTACTTCCTGAAGGGTTCATGCAAGTATGGTGCTGGGTGTCATCTCAACCACAACCTTCAGAGTTCATCAGCTGGACAAAGTAGACAAGTTAGCAGAGAGTCATCAGCAGACACTGACGAGGAATGTGACGGGCCCTACAGATGGCAGCTGAATTTTGGAAAGGGCTGGAAAAACATTTCCAATGATCACATTCTAGAAGCCCAATATTCACTCCCTAACACCAAAGGAATCAAGATCTATAACACCCACGCTGGGGTGATTTCGATTGATTTCACTAAAATGAGAGTTCTTAAGAAAAAGAATATTAAAGTGCGACGTATGAACTCAAAGGATACAGAGTGGTTGTGGCATTACAGAGGTGACCACTGCTGGTACCAGTATGGAGGGAAGGGCAAAAAAAGTCCAATTGAGAGCTCAAAACTGGAGACGAAGTATCAAAACAACCGACGTGGTTCAGTAAAGTTCACCATTGACTCTACCCAGTATGAGATTAGCTTTAAAGGAATGTGTCAGACAAATTTATCTACAGGCCATAAGAGGCGGGTTAGACGGCGCCCTAAATATGAACAATCAAAAAGTGGAGGAGTAAAAACTCTTTTTCTGTAGTAAAAACAGCCTCAGAGGGTTTTAGTATAACATTTTTTATAAGATGGGTAACATTTTCAGGAGTGAAGCTCACCCTGTTGA

Function

NR:

description
Si:ch211-244b2.4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000019_01173165_01178310.mRNA True 1524 mRNA 0.39 8 1172544 1178391

Neighbor

gene id symbol gene type direction distance location
CI01000019_01112433_01123179 ST8SIA1 coding upstream 47779 1112122 ~ 1124765 (+)
CI01000019_01067005_01080043 B4GALNT3A coding upstream 91442 1067005 ~ 1081102 (+)
CI01000019_01025556_01025846 NA coding upstream 146467 1024374 ~ 1026077 (+)
CI01000019_01021871_01022293 NA coding upstream 150003 1020747 ~ 1022541 (+)
CI01000019_00871622_00875254 NA coding upstream 297017 869371 ~ 878017 (+)
CI01000019_01185485_01189927 NA coding downstream 7094 1185485 ~ 1190732 (+)
CI01000019_01224023_01232161 USP44 coding downstream 45632 1224023 ~ 1232942 (+)
CI01000019_01281704_01306187 FGD6 coding downstream 101923 1280314 ~ 1306211 (+)
CI01000019_01310939_01319204 NR2C1 coding downstream 132548 1310939 ~ 1319586 (+)
CI01000019_01320371_01322904 NDUFA12 coding downstream 141980 1320371 ~ 1322991 (+)
G107264 NA non-coding upstream 14507 1157789 ~ 1158037 (+)
G107263 NA non-coding upstream 15186 1156780 ~ 1157358 (+)
G107259 NA non-coding upstream 21233 1151088 ~ 1151311 (+)
G107257 NA non-coding upstream 23095 1149169 ~ 1149449 (+)
G107250 NA non-coding upstream 28769 1143477 ~ 1143775 (+)
G107205 NA non-coding downstream 36545 1214936 ~ 1216950 (+)
G107278 NA non-coding downstream 57990 1236381 ~ 1236640 (+)
G107279 NA non-coding downstream 58383 1236774 ~ 1237016 (+)
G107182 NA non-coding downstream 188676 1367067 ~ 1371980 (+)
G107193 NA non-coding downstream 196725 1375116 ~ 1375470 (+)
G107312 NA other downstream 451041 1629432 ~ 1629985 (+)
G107310 NA other downstream 522354 1700745 ~ 1706990 (+)
G108050 NA other downstream 1162608 2340999 ~ 2341333 (+)
G108563 NA other downstream 1989957 3168348 ~ 3169195 (+)
G108454 NA other downstream 2034060 3212451 ~ 3234285 (+)

Expression


Co-expression Network