CI01000019_01025556_01025846


Basic Information

Item Value
gene id CI01000019_01025556_01025846
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000019
NCBI id null
chromosome length 5832599
location 1024374 ~ 1026077 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000019_01025556_01025846.mRNA
GCATAAATAGGTAAACATATGAGAGTACACTCCCCATCCCAGAATACATCAAAGGGGTGGGCGCCTTGGAGGCAGATCAGGGGGCCAGGGCGAAGCCAGCAGTTCAGGGGACCATGGCGGCTCTGGCAGCTCAGGAAGCCATGGAGATGCTGGCAAACCAGGAAACCAGGGCAGATCAGCCTCCGTGGCCTTGAGCCTGGAGCTTGGCCGAGGACGTATAGCCCCGAAATGTTCCAAATTTTTGGGGGTTATGAAGTGGAGCAGGCTCTTGGGCTGGAGTAGACTCTGGTACAGGCTCATGGGCTACAGCAGACTCTGGAGCGGACTCAGGGGCTGGAGCAGACACTGGAGCCGACTCAGGGGCTGGAGACGACTCTGGAGAACATACTGGACTGGACTCTGGAGAACATACTGGACTGAACTCTGGAGAACATACTGGACTGGACTCTGGAGAACATACTGGACCAGACTCTGTATCGTGCTCAAGGGCTGGAGCCATATCTGGGCTCCAAGACATCCCCTCATACACCAATACTCCTAGGGACACATGCGTGGCGGCCATGACAGGACGAGACTCTGGAATGGCGGCCAGGACAGGACAAGGCTCTGGAATGACGGCCATGTCAGGACGAGACTCTGGATTGACGGCCATATCAGGACAAGACTCTGGAATGGCTGTGACCATGTTGGGGCGAGACTCTGGAATGGCGGCCACATCAGGACGAGACTCTGGATTGACGGCCATGTCGGGACAAGACTCTGGAATGGCTGCGACCATGTTGGGGCAAGACTCTGGAATGGCGGCCATGACTCGAGACTTTCACTCACTGGAACTGATACTGTGATGATAAAGCTGAATCCTCTCTCAGTCATGATCTACATGAGGTAGTCAGTCAGGTCACGGCTGGCCAGGTCCATTGTTGAATCTTTGCTTAGGTCAAGTCACCTTTATTTATATAGCGCTTTTAACAATGCAGATTGTGTCAAAGCAGCTTTACAGTGATAGCTGGTATATAATTTTGGCTGCACAGCAGCTCTTAAAGAAAATGGTGTCATTATCCATCTTAAAGGTCCCATGACATGCTACTTTTTGGATGCTTTTATATAGGCCTAAGTGGTCCCTAGTACTGTATCTGAAGTCTTTTTCCCGAAATTCAGCCTTGGTGCAGAATTTCAGGCATTATGAGACAGTCCCACAATGAGCTTTCCTCAGGACGTGCCATTTCTGGGTCTGTAGCTTTAAATGCTAATGAGGAGGAGAGAGGCGGGGCAAGGTGGAGGGTGGGTGTGGTCTTAACCAGCTTGCAGCCACGGTACCATGCGCTAATGTTGACAGTGGATGTATCGCAATGGCTCATAGACCCGCAGTCGTTCAAGCGTTTCAGTTCGACCCAGAATCCAATCCGGATGGAGAAGCACCGGATGAAGAAGTTGCAACTCAGCGGCTACAGCAGGACGTCTCAGAGTGGTTAGTTTAAATTAAATATCATTAAATTTTAATTTAAAATGTATTATCATGTAGCTAATGCTAGCCTAAACAAACAAGCTTGATAAAAAAATAAATAAATAAAACTCATTTTAGAAGACGATTTCAGACGGCACTTAGAGGCTTTTGCATCTGAAGTCTTCAATTACATCAAGCTCTGCAATCTGTAAATGTGGATATCGCGTGCACCATAACACCAACAGCAGAACGGTTATCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000019_01025556_01025846.mRNA True 1704 mRNA 0.49 1 1024374 1026077

Neighbor

gene id symbol gene type direction distance location
CI01000019_01021871_01022293 NA coding upstream 1833 1020747 ~ 1022541 (+)
CI01000019_00871622_00875254 NA coding upstream 148847 869371 ~ 878017 (+)
CI01000019_00848936_00865021 NA coding upstream 158871 847966 ~ 865503 (+)
CI01000019_00809471_00828531 NA coding upstream 194632 808791 ~ 829742 (+)
CI01000019_00791525_00800217 NA coding upstream 223958 791219 ~ 800416 (+)
CI01000019_01067005_01080043 B4GALNT3A coding downstream 40928 1067005 ~ 1081102 (+)
CI01000019_01112433_01123179 ST8SIA1 coding downstream 86045 1112122 ~ 1124765 (+)
CI01000019_01173165_01178310 NA coding downstream 146467 1172544 ~ 1178391 (+)
CI01000019_01185485_01189927 NA coding downstream 159408 1185485 ~ 1190732 (+)
CI01000019_01224023_01232161 USP44 coding downstream 197946 1224023 ~ 1232942 (+)
G107114 NA non-coding upstream 116073 907218 ~ 908301 (+)
G107004 NA non-coding upstream 188188 835671 ~ 836186 (+)
G107011 NA non-coding upstream 208211 789727 ~ 816163 (+)
G107066 NA non-coding upstream 242226 781673 ~ 782148 (+)
G107219 NA non-coding downstream 13115 1039192 ~ 1039416 (+)
G107239 NA non-coding downstream 74285 1100362 ~ 1100567 (+)
G107247 NA non-coding downstream 114365 1140442 ~ 1140901 (+)
G107250 NA non-coding downstream 117400 1143477 ~ 1143775 (+)
G107257 NA non-coding downstream 123092 1149169 ~ 1149449 (+)
G107312 NA other downstream 603355 1629432 ~ 1629985 (+)
G107310 NA other downstream 674668 1700745 ~ 1706990 (+)
G108050 NA other downstream 1314922 2340999 ~ 2341333 (+)
G108563 NA other downstream 2142271 3168348 ~ 3169195 (+)
G108454 NA other downstream 2186374 3212451 ~ 3234285 (+)

Expression


Co-expression Network