CI01000019_00809471_00828531


Basic Information

Item Value
gene id CI01000019_00809471_00828531
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000019
NCBI id null
chromosome length 5832599
location 808791 ~ 829742 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000019_00809471_00828531.mRNA
CTATATATAACAGTGACCTTATATAACCTTATATAACATAACTGTTGCGTTTTTATTATTGTTGATTTATGACTACAGCTCTAACGTTACTTACATTTCAAAATGTAAGTAATTGTCTGTGCTATAGACAGCAGATATGCTGGCAAGAAGCAAGTTTCACATATCTTGTACTCCAGATTGTAATGCTACAGGACACCCCTGCACGTCACGCCCTCTCCCTCTCCTTATTGCGTGCAGCACTCAAGAATACTGCACTCTGCACTGACACTCTGTGCATGCATGTTAGGGAACGGTCCACAAACTTCGGTAAGTCCAAGGATTTTTTTGTCTGGATTTTTAATTATTATCCATTTTAAACTGTTTCTGTTATGTATCATTTCTCTTTGGAGAGTGAGATTCATTTAATAATTCCATGTAAACATTCATTCACTGTTATTTCTTGAAAAACAGTTTATATATACAAGTACAAAATATTAAATTTGAAAATATTAAGTTGTAAATGTTAGTTCCATTACTGAATGTAAGTATGCTTATATGATCATTAGTTCAAAGCAAAAAAACAAAGAATACTTTGCAAAAACTTATCCACAAAAAAGCAGGCTCACTGTTCTGCATGCTGATGTACTTTTAATAACTCATAATAAACTGAATGCTTACAGAGAGGTAAATAGAAAAGGGCCATGGAGGAGACTAGAGATGGAGGCATTGCTGATGGGGAAGCTATGGAGCCTGAGGCTCAGAAAGGGAGCACAGAAAGCATACCCGAGGTCAGGGAGAAATGGGCCAACAAGACTGAGTTCCTGCTTTCCATGGCTGGGGAGATTATCGGCCTGGGGAACGTGTGGCGCTTCCCTTACCTGTGCTACAAAAATGGAGGCGGTGTTTTCTTCATTCCTTATTTCATCTTTCTCTTCTTTTGTGGAATCCCAGTATTCTTCCTTGAGACAGCGTTAGGTCAATACACCAGTGAAGGGGGCATCACTGCTTGGAGAAAAATCTGCCCCATGTTTGAAGTGAACTGCCAAAATATAAGTGCTACATACACAGGTGTGCACAGACCTGATGCTGACTGGTCATTCCTGTACAATAAGACGGATCAATTTGGTGACAACTACAGCATGAGCCATCGTATGTTGCGGATGACAGACAGTGGTGGTTTGGGGAGCGTAAATGCTGATCTTGCCATGTGTCTTCTGTTGGCTTGGGTCATCTGTTATTTCTGCATTTTTAAAGGAGTAAAGACCACAGGCAAGGTTGTGTACTTCACTGCTACATTCCCCTACTTAATGCTGTTCATCCTTTGCATCAGAGGAGTGACTCTGCCAGGGGCTGCAACTGGGATTTCTTATTACCTGTATCCTGACATCAGTAAACTCTCCAGTCCTGATGTATGGTGTGATGCAGGCACTCAGGTGTTTTTCTCATATGCTGTGTGTCAAGGAGTCCTCACAGCGCTGGCCAGTTATAACAAATACAACAATGACTGCTATAAGGACTGTATAGCACTCTGTCTTTTGAACAGCTGCACTAGCATCTTTGCTGGGTTTGTGGTCTTTTCTATTCTGGGGTTCATGGCCCATCAGCTAGATCTACCAATGGAAGATATTGTATCATCAGGTGTTGGATTAGCTTTCATAGCATATCCTCGAGCCCTCTCTCTGTTACCTGGACCTCAGTTCTGGTCTGTTCTTTTCTTTCTTATGGTACTCCTGCTGGGCCTTGACAGTCAGTTTGTGTGTGTGGAGAGTTTAGCCACAGCTCTCACAGACCTGTTTCCTGGAGTTCTAAGAAAGCGGCGAGAAGTTTTGGTGTTGGGAATAGCCATCATCTGCTTCTTACTGGGACTGCCATTCATCACAAAGGGAGGAATCCATCTGTTCACTGTGATGGACACCTACGGCCCAAGTGGAATTAACTTGCTCTTTATCGCCTGCTTTGAGACGATTGTTGTCGCATGGGTCTATGGTATGAGACATTAACACTTTCCTGTGAAATTCCTAGTATCTGACATACAGTACAATACACTAAAGTATGAAAATCTTTTTTTATTATTCTTATTGAACATCTTATTTCTCTACATCACATTATGGAAGTAAAATGGTTTGTAAATGCTGTTTCACAAAAAACAACATTCTTTACATTATACAGTTGCAAGAAAAAGTATGTGAACCACTTGCAGAATTTGTGAAAATGTGAAAAATTTTAACAAAATAAGAGAGATCATACAAAATGCATGTTATTTTTCATTTAGTACTGTCCCGAGTAAGATATTTTACATAAAAGATGTTTGCATATAATCCATAAGACAAAAAATAGCTGAATTTATTAAAATGACCCCATTCAAAAGTTTGTGAACCATTGATTCTTACCTGAATGATCTACGACTGTTTTTTTTTTTGTTTTGTGATGGTTGTTCATAAGTCTCTTGTTTGTTCTGAGCAGTTAAACTGAGCTCTGTTCTTCAGAAAAATCCTCCAGGTCCTGCAGATTCTTCAGTTTTCAAGGATTTTTTGCATATTTGAACCCTTTACAGCAGTGACTGAATGATTTTGATATCCATCTTTTCACACTGAGGACAATTGAGGGACACAAACACAACTAATAAAAAAGGTTCAAACATTCACTGATACTCCAGAAGGAAACACGATGCATTAAGAGTCAGGGGGTGAAAACTTTTGAACAGGATGAAGATGTACAAATTTTTCTTATTTCGTTTAAATATCTTTTTTTTTTTTCCATTTAGTACTGCCCTTCGAAAGCAACAGAAGATGCTTACATGTTTCCCAGAAGACAAATTAAGTATAATTTACCTTGATCTTCAAATTCAAAGTTTTCACCCCCAGGCTCTTAATGCATTGTGTTTCCTTCTGGAGCATCAGTGAATGTTTGAACCTTTTTTATTAGTTTTGTAATGATCTCTCTTATTTTGTTAAAATTATTCACATTTTCACAGATTCTACAAGCGGTTCACATACTTTTTCTTGCAACTGTATATCAAAAATAACTTTTCTAAACTTGCAGCAAATGCATAATTATCATGTACTAAATAATTATTACTATGTAATTACATTGCAATATGACTACTCATTATGTGTGACATTTGTGAGTGTTTATTGAACATTCACATATTCCTAAACTAGTTTACAGAGTAGTTTAAGTTGAGTAAGCATATCTTTTAGCCCTATGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000019_00809471_00828531.mRNA True 3190 mRNA 0.38 10 808791 829742

Neighbor

gene id symbol gene type direction distance location
CI01000019_00791525_00800217 NA coding upstream 8375 791219 ~ 800416 (+)
CI01000019_00786469_00789270 NA coding upstream 19222 786413 ~ 789650 (+)
CI01000019_00785792_00786324 NA coding upstream 22393 785792 ~ 786398 (+)
CI01000019_00750525_00759434 RYROXD1, PYROXD1 coding upstream 48947 750141 ~ 759844 (+)
CI01000019_00739862_00741111 IAPP coding upstream 67591 739862 ~ 741200 (+)
CI01000019_00848936_00865021 NA coding downstream 18224 847966 ~ 865503 (+)
CI01000019_00871622_00875254 NA coding downstream 41880 869371 ~ 878017 (+)
CI01000019_01021871_01022293 NA coding downstream 191005 1020747 ~ 1022541 (+)
CI01000019_01025556_01025846 NA coding downstream 194632 1024374 ~ 1026077 (+)
CI01000019_01067005_01080043 B4GALNT3A coding downstream 237263 1067005 ~ 1081102 (+)
G107066 NA non-coding upstream 26643 781673 ~ 782148 (+)
G107000 NA non-coding upstream 45665 762841 ~ 763126 (+)
G107062 NA non-coding upstream 59424 749067 ~ 749367 (+)
G107061 NA non-coding upstream 60594 747940 ~ 748197 (+)
G107056 NA non-coding upstream 65180 743402 ~ 743611 (+)
G107004 NA non-coding downstream 5929 835671 ~ 836186 (+)
G107114 NA non-coding downstream 77476 907218 ~ 908301 (+)
G107219 NA non-coding downstream 209450 1039192 ~ 1039416 (+)
G107239 NA non-coding downstream 270620 1100362 ~ 1100567 (+)
G107312 NA other downstream 799690 1629432 ~ 1629985 (+)
G107310 NA other downstream 871003 1700745 ~ 1706990 (+)
G108050 NA other downstream 1511257 2340999 ~ 2341333 (+)
G108563 NA other downstream 2338606 3168348 ~ 3169195 (+)
G108454 NA other downstream 2382709 3212451 ~ 3234285 (+)

Expression


Co-expression Network