G107259


Basic Information

Item Value
gene id G107259
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000019
NCBI id null
chromosome length 5832599
location 1151088 ~ 1151311 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU121935
ATTACATTAGTCTGCTATCAATAGCTGGGTTTCCATCCAAACGTGAAGTGAATCTGTTCAAAGTTCCCTAAAAAAGAAAGAAAAACTAATTCAAATTAGGTGCGTTTCCATCGAGTTGTTCGAGCGGATGACGGTGGTATGGTAACCTAGTAACCAACAGTAAATAAAACACTGTGACCGAGCGTTCGTGAAAGCTTCGCCTAAACACTTATGAATATGAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121935 True 224 lncRNA 0.39 1 1151088 1151311

Neighbor

gene id symbol gene type direction distance location
CI01000019_01112433_01123179 ST8SIA1 coding upstream 26323 1112122 ~ 1124765 (+)
CI01000019_01067005_01080043 B4GALNT3A coding upstream 69986 1067005 ~ 1081102 (+)
CI01000019_01025556_01025846 NA coding upstream 125011 1024374 ~ 1026077 (+)
CI01000019_01021871_01022293 NA coding upstream 128547 1020747 ~ 1022541 (+)
CI01000019_00871622_00875254 NA coding upstream 275561 869371 ~ 878017 (+)
CI01000019_01173165_01178310 NA coding downstream 21233 1172544 ~ 1178391 (+)
CI01000019_01185485_01189927 NA coding downstream 34174 1185485 ~ 1190732 (+)
CI01000019_01224023_01232161 USP44 coding downstream 72712 1224023 ~ 1232942 (+)
CI01000019_01281704_01306187 FGD6 coding downstream 129003 1280314 ~ 1306211 (+)
CI01000019_01310939_01319204 NR2C1 coding downstream 159628 1310939 ~ 1319586 (+)
G107257 NA non-coding upstream 1639 1149169 ~ 1149449 (+)
G107250 NA non-coding upstream 7313 1143477 ~ 1143775 (+)
G107247 NA non-coding upstream 10187 1140442 ~ 1140901 (+)
G107239 NA non-coding upstream 50521 1100362 ~ 1100567 (+)
G107219 NA non-coding upstream 111672 1039192 ~ 1039416 (+)
G107263 NA non-coding downstream 5469 1156780 ~ 1157358 (+)
G107264 NA non-coding downstream 6478 1157789 ~ 1158037 (+)
G107205 NA non-coding downstream 63625 1214936 ~ 1216950 (+)
G107278 NA non-coding downstream 85070 1236381 ~ 1236640 (+)
G107279 NA non-coding downstream 85463 1236774 ~ 1237016 (+)
G107312 NA other downstream 478121 1629432 ~ 1629985 (+)
G107310 NA other downstream 549434 1700745 ~ 1706990 (+)
G108050 NA other downstream 1189688 2340999 ~ 2341333 (+)
G108563 NA other downstream 2017037 3168348 ~ 3169195 (+)
G108454 NA other downstream 2061140 3212451 ~ 3234285 (+)

Expression


Co-expression Network