XLOC_008205 (si:dkey-7i4.24)


Basic Information

Item Value
gene id XLOC_008205
gene name si:dkey-7i4.24
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 714203 ~ 721558 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016547
TTGTTCTCTATATCACTTAAAAGGTTTTCAGTACATGATACTGAGACCAAGTACATTTAGGGAGAACTTTCTACTCACGTTTTTGTGTAAACCTACTGAAAATGGCTGATAGCAAACTGGCTGTGACCCAATGGAGCCCTTCGTTTGTAGAAGACCTTCTCCCTGCGGCTGAAAAGACGGCCCTTCTGTACCATCTCTCTTACCTGTGCCTGGCCAACTTCCCCAACCTGGAGAGGATCATCAGGAGTCGGGCTGTGGAAACCCAGCTCCTCTTTGGGTCCTCTGATGCAGCCATATTGAAATGTATTTTGACCAGTGAAAACCTGGTTCAGTCGCTGTTTCCCATGTTGACAACAGCTGTAGAAAAAAATAAGCCAGTTTTGGCTGTCAAATACCTGGCAAAGGCACGAGACTGGATCAAAGACCTAATCAAGGATGTGGACAGGATTGTGGAAAAGTATGAGTTACACACCAAAGATATAGCATCGTCCGCTAGTGATGTTGTCAAGGAAAAATCAGATACAGACAAAAAGATTGCAGAGCAAGACCAGGAGCTGAATGCGATTGAAAACACTCTGAATGTGCTGAAATCTGATCTCCAAAACACTAACGCGGAACTTGCTCAAACTGAGAAGAAAATTACCGACAAAACTCAAGAGATTCAAGCCTTTGCCAAATCCATAAGCCAAACCAGCAAAGGCCTCGGCATCTTCGCTGCAATCGTGCCATTTGTTGGGCTAATCATCAAAAGCATTTATGATGCTGTAAAGAGTCCCGAACAAGCTGCGCAAATGAAGGCACTTGAGGCAGAGTTGAATAATCTGATTGCTGATAAAACCGCTCTGAAACAAAAGCAGTGGCAGCTCCAGCTCCAGACGATTGACTGGCAGATGAAGGCTGCCAAAGCCAGTTTTGACCGGAGTTCCATACCTGACCCCATCCATCTAAGCGAGGTGCAGGGCAGCTTGACCAAAATTCAGGAAATTCTGATTCAGCTCAAAAACTTCTGGGAGAGCGTCGCTCAAATGCTGGACTACCTAGAACAAAGGACCTTTGTTGGAGAAGATCTTATTGAAGACCTTAAAGAGCTAAAAGATGAATTTCTTAAATCAATCACCGCAGCCATAGAGGCTTGGAGCAGTTTTGGTGCAGGCTGTCAGAAAGCTTCTGTCATCTTTAAGCTCCAAGCCAAAGATGCCTACAAGTTCCTGGAGGTCAGTCCTTCCTCTCTCTCCAAGGAGGAATGGCAAAAGGAGTATGAAGATGTCAAGGCACAACTAGGGAAAATAGACCCCTCACCAAGCCTGCAGTCCTCAGATGGACATGCTATTTGTCAGTGATCCTCAGAGCACCAACATGCACAAGTGCATTATTTCACTTCTTTTCGGTAACCTGGAGTGAACACATTTATTACTGCTGAAAAGTCGTGTATGCCCCTCTGCTTGATGCTTCAACACTGCATAAATCATGTCCTCTGTGTGTGCTCTGTATGCACTTTTACAACAAGAATGCTGTTAAATgcatgaaaaaatgaatgaaaaaacatcACATTTAGTGAATAAAG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-1157 No description available

Ensembl:

ensembl_id ENSDARG00000096906

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016547 True 1564 mRNA 0.44 7 714203 721558

Neighbor

gene id symbol gene type direction distance location
XLOC_008204 NA coding upstream 44759 658362 ~ 669444 (+)
XLOC_008203 znf1013 coding upstream 70732 638457 ~ 643471 (+)
XLOC_008202 si:ch211-210b2.1 coding upstream 77041 618081 ~ 637162 (+)
XLOC_008201 si:ch73-144d13.4 coding upstream 132248 577698 ~ 581955 (+)
XLOC_008200 NA coding upstream 166322 546153 ~ 547881 (+)
XLOC_008206 NA coding downstream 46623 768181 ~ 768435 (+)
XLOC_008207 znf970 coding downstream 60159 781717 ~ 787548 (+)
XLOC_008208 si:dkey-7i4.1 coding downstream 69662 791220 ~ 805111 (+)
XLOC_008209 si:dkey-7i4.8 coding downstream 86339 807897 ~ 822471 (+)
XLOC_008210 si:dkey-7i4.7 coding downstream 101879 823437 ~ 827462 (+)
XLOC_008463 BX663520.1 misc downstream 20530633 21252191 ~ 21252282 (+)
XLOC_008197 NA non-coding upstream 214380 497208 ~ 499823 (+)
XLOC_008218 CU571333.1 non-coding downstream 357431 1078989 ~ 1079104 (+)
XLOC_008225 NA non-coding downstream 500259 1221817 ~ 1234693 (+)
XLOC_008229 dre-mir-15c non-coding downstream 822128 1543686 ~ 1543768 (+)
XLOC_008230 dre-mir-16a non-coding downstream 822299 1543857 ~ 1543943 (+)

Expression


Co-expression Network