XLOC_008229 (dre-mir-15c)


Basic Information

Item Value
gene id XLOC_008229
gene name dre-mir-15c
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 1543686 ~ 1543768 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016597
CCTTAGACCGCTAAAGCAGCGCGTCATGGTTTTCAACATTAGAGAAGGTGCAAGCCATCATTTGCTGCTCTAGAGTTTTAAGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000081366

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016597 True 83 miRNA 0.46 1 1543686 1543768

Neighbor

gene id symbol gene type direction distance location
XLOC_008227 il12a coding upstream 94981 1440364 ~ 1448705 (+)
XLOC_008226 schip1 coding upstream 106979 1372343 ~ 1436707 (+)
XLOC_008225 NA coding upstream 308993 1221817 ~ 1234693 (+)
XLOC_008224 mfsd1 coding upstream 323563 1199407 ~ 1220123 (+)
XLOC_008223 gfm1 coding upstream 348674 1167119 ~ 1195012 (+)
XLOC_008230 dre-mir-16a coding downstream 89 1543857 ~ 1543943 (+)
XLOC_008231 nmd3 coding downstream 110011 1653779 ~ 1672461 (+)
XLOC_008232 NA coding downstream 149429 1693197 ~ 1718629 (+)
XLOC_008233 otol1b coding downstream 161399 1705167 ~ 1711472 (+)
XLOC_008234 cul3b coding downstream 222220 1765988 ~ 1795631 (+)
XLOC_008463 BX663520.1 misc downstream 19708423 21252191 ~ 21252282 (+)
XLOC_008218 CU571333.1 non-coding upstream 464582 1078989 ~ 1079104 (+)
XLOC_008206 NA non-coding upstream 775251 768181 ~ 768435 (+)
XLOC_008204 NA non-coding upstream 874242 658362 ~ 669444 (+)
XLOC_008200 NA non-coding upstream 995805 546153 ~ 547881 (+)
XLOC_008236 CU638704.1 non-coding downstream 329890 1873658 ~ 1873778 (+)
XLOC_008239 CU695208.1 non-coding downstream 814743 2358511 ~ 2358625 (+)
XLOC_008245 CR382327.2 non-coding downstream 1130167 2673935 ~ 2674590 (+)

Expression


Co-expression Network