XLOC_008218 (CU571333.1)



Basic Information


Item Value
gene id XLOC_008218
gene name CU571333.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 1078989 ~ 1079104 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00016581
ggccacagccatgtcactctgcagcccaagactggttactcactgaagctaagcagggctgaggctggtcagtacctggatgggagaccactagggaacactgttggaagtggtgt

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000108373

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00016581 True 116 rRNA 0.56 1 1078989 1079104

Neighbor


gene id symbol gene type direction distance location
XLOC_008212 si:dkey-7i4.5 coding upstream 68468 846768 ~ 1010521 (+)
XLOC_008217 znf1007 coding upstream 85556 983741 ~ 993433 (+)
XLOC_008216 alox5b.2 coding upstream 102636 963292 ~ 976353 (+)
XLOC_008215 si:dkey-77f5.10 coding upstream 137216 934660 ~ 941773 (+)
XLOC_008214 si:dkey-77f5.11 coding upstream 168487 863931 ~ 910502 (+)
XLOC_008219 igsf10 coding downstream 7552 1086656 ~ 1107108 (+)
XLOC_008220 p2ry12 coding downstream 37560 1116664 ~ 1120421 (+)
XLOC_008221 p2ry13 coding downstream 55766 1134870 ~ 1142663 (+)
XLOC_008222 mlf1 coding downstream 68970 1148074 ~ 1162658 (+)
XLOC_008223 gfm1 coding downstream 88015 1167119 ~ 1195012 (+)
XLOC_008463 BX663520.1 misc downstream 20173087 21252191 ~ 21252282 (+)
XLOC_008206 NA non-coding upstream 310554 768181 ~ 768435 (+)
XLOC_008204 NA non-coding upstream 409545 658362 ~ 669444 (+)
XLOC_008200 NA non-coding upstream 531108 546153 ~ 547881 (+)
XLOC_008197 NA non-coding upstream 579166 497208 ~ 499823 (+)
XLOC_008225 NA non-coding downstream 142713 1221817 ~ 1234693 (+)
XLOC_008229 dre-mir-15c non-coding downstream 464582 1543686 ~ 1543768 (+)
XLOC_008230 dre-mir-16a non-coding downstream 464753 1543857 ~ 1543943 (+)
XLOC_008232 NA non-coding downstream 614093 1693197 ~ 1718629 (+)
XLOC_008236 CU638704.1 non-coding downstream 794554 1873658 ~ 1873778 (+)

Expression



Co-expression Network