XLOC_008221 (p2ry13)


Basic Information

Item Value
gene id XLOC_008221
gene name p2ry13
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 1134870 ~ 1142663 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016586
AGCTGCCGGAAGGCATTAAGACATTATTAATTCCTCTTTAAGGGCGCTCGCTTGTCTCCTGGCAGCAAAATGAACCTGAGTCAGGTGAACGCTTCTCTGAAGTGTGAGCGGGACACTCGGGTTACATCCATACTGTTCCCCTGCCTGTACGCGGCTCTCTTCCTGCTGGCGTTGGTGTTGAACAGTCTGGCCGCCTGGATCTTCTTCCAAATCCGCAGCAGCTCAACCTTCATCGTGTACCTGAAGAATGTGGTGGTGGCAGATCTGCTGATGACTCTCACCGTGCCTGTGAAAGCTCTGACAGACGCCGGTTTAGGCTCCTGGCACCTCCGGGCCTTCCACTGCCGCTACTCCGCCGTGCTCTTCTACACCACCATGTACATCAGCATCCTCCTGCTCGGGTTCATCAGCTTGGACCGCTACCTGAAGATCGTGCATCCGTTCGGGAAATGCGTCCTCCAGAGGGTCAGGGTGGGTCGGGTTCTGTGTGCAGTGACCTGGGCGGTCATGCTGTCTTTAGCGCTGCCCAATGTTATCCTGAGTAACCGCATGCCACAGATCTCCCCCGGCGGGAGGCTACGCTGCACCAGGATGAAGGGGAAGATGGGTCTGCTGTGGCACGAAGGCTTCAACTACTTCTGCCAGGTTGTTTTTTGGGGAACTTTGGCGCTCATGGTTGTTTGCTACACCTTCATCAGCAGGAAGGTGTTCGAGTCGTACCGTGCATCACAAAGCAGCAGTGACGTAACCAGCAAACAGACCACATCTAAGGTGTTTGTGGTGGTGGgggttttctttgtttgcttcgCCCCCTTCCACCTGGCCCGAGTCCCGTACACCCTCAGCCAGACGCGGAGCACTTCAGCCCAGTGCTGGGCCCAAAACCAGCTGTATTTCGCCAAAGAGATCACGCTCTGGATATCATCCTCTAATGTGTGTCTGGACCCGCTCATTTATGTTTTCCTGTGTCGCGGTTTCCGCAAGAAGCTGACTGCCACACTGAGCCGCGCTCCGCTCCCTCACGGCTCTCTGACCGAGACCTCCACCAAAATAGAGATGCCAAACAGAGGACACTGAAGCACAGATGCAGATCTACATGGTCATGACATCCTGATCTGCCTACTGGAGGCCCGGACTTAATCCTCTGCACTTCACTATGAGAACCAGTTCTTTGTGGAAATATGAAGTCTTTATTTTTGTCAAGTAAATATGTTTAAagtccaccctaaaggactgatagctctgccctaaatgacttaaAGCCCCGCCCTAgaggactgatagccacaccctaaacaATGGATAGGTCCACCCTAAAgtactaatagccccaccctaaatgactgatagtcccgccctaactaactgatagtcccgccctaactGACTTATAGGCCCAccataaaggactgatagcttcgctctaaattactgatagccctgccctaatggTCAGATAATGCCGGCCTGATAGGTCCGCCCTTAAGTATTTAAAAcaccaccctaaaagactgatagacCCTCCATAAATTACTGATAACCTTGCcttaaagtactgatagctccgacccaaattactgatagccctgccctaatggTTTGATAATCCCgccctgatagctccgccctaaaggactgaaagaCCCTCCCTAAATTACTAATAGCTTTGACCTAAAGTACTGATAACTCCGAACCAAATTACTGATAGACCTGCCTTAATAGACTGATAACCTTgccctgatagctccgccccaagTGACTGATAGACCCTCCCTAAATTACTGACAGCCTTACCCTAAAGCCCTGGCCTAATGgtctgatagccccgccctaaaggactgataggtccaccctaaagtactgatagctccgcccctaaATTATTGACAGATATGCCCTAATAGACTAATAATCCCcgcgatagctccgccctaaaaaatGTATAACTCTCCCCTTAGTATTTAAAACTCCGCTTTgaactgatagacccgccctaagtTACTGATAGCTTCAAcccaaataactgatagccctggCCTAATggtctgatagccccaccctaaagtactgatagccccgccctaaaggactgattggtccaccctaaagtactgatagctctactttaaaggactgatagctccgccctaaattatTGACAGACATGTCCTATTGGACTAATAATGCCctcctgatagctccgccctaaaataATTCTAACTCCGCCTTAAACAACTGACAGACCCGAccaaaattactgatagctccacccgaattgactgatagctccgccctaaattactgatagctccaccctaaaggtgTTCCATGTGACCACAAGTGAAGAAGTCTTTTCGAGGGGGAGGGAAGATTATGGTGATCTATAATAAAGATTATGAGCgcaaattaatttttacattataatGTATGCAAAATATTTCAATACACAAATTTTTACCAACTACAGTTAACAACAGTTTACAagcaggaaaacacacacacacacacacacacacacacacacacaaacacaggaaaacaactGTTACTGGAAAGCATTCGCTACTAGTTTTCATGAGTTTATGTTAACCAGCTGATGGTTTGTAAAGGTGTTTGTTGTGGAGACATTAGAACATCTGACATGGTttgtgtttgttcatttgttgcaCACATTAAGCTTATTTTCATACTGCAGTTGTTTTTCAGAGTACTAGACATCACTGATAGACCAACACTGTCAGGGTCATCTTCCTGCCTCACTATCAGAGACAACAGCAGTGTTTATTTCCCCTCCAGTGTAATCTTTGCCATTCTGTGTCTCCTCTTCTGTGAAAAGAGCTTTTATTTTGTGCACTGTAatgaaatataatgaataaaatgcGTGCAGTTTAATAAGCCTGCCTTGG
>TCONS_00016587
ATGAACCTGAGTCAGGTGAACGCTTCTCTGAAGTGTGAGCGGGACACTCGGGTTACATCCATACTGTTCCCCTGCCTGTACGCGGCTCTCTTCCTGCTGGCGTTGGTGTTGAACAGTCTGGCCGCCTGGATCTTCTTCCAAATCCGCAGCAGCTCAACCTTCATCGTGTACCTGAAGAATGTGGTGGTGGCAGATCTGCTGATGACTCTCACCGTGCCTGTGAAAGCTCTGACAGACGCCGGTTTAGGCTCCTGGCACCTCCGGGCCTTCCACTGCCGCTACTCCGCCGTGCTCTTCTACACCACCATGTACATCAGCATCCTCCTGCTCGGGTTCATCAGCTTGGACCGCTACCTGAAGATCGTGCATCCGTTCGGGAAATGCGTCCTCCAGAGGGTCAGGGTGGGTCGGGTTCTGTGTGCAGTGACCTGGGCGGTCATGCTGTCTTTAGCGCTGCCCAATGTTATCCTGAGTAACCGCATGCCACAGATCTCCCCCGGCGGGAGGCTACGCTGCACCAGGATGAAGGGGAAGATGGGTCTGCTGTGGCACGAAGGCTTCAACTACTTCTGCCAGGTTGTTTTTTGGGGAACTTTGGCGCTCATGGTTGTTTGCTACACCTTCATCAGCAGGAAGGTGTTCGAGTCGTACCGTGCATCACAAAGCAGCAGTGACGTAACCAGCAAACAGACCACATCTAAGGTGTTTGTGGTGGTGGgggttttctttgtttgcttcgCCCCCTTCCACCTGGCCCGAGTCCCGTACACCCTCAGCCAGACGCGGAGCACTTCAGCCCAGTGCTGGGCCCAAAACCAGCTGTATTTCGCCAAAGAGATCACGCTCTGGATATCATCCTCTAATGTGTGTCTGGACCCGCTCATTTATGTTTTCCTGTGTCGCGGTTTCCGCAAGAAGCTGACTGCCACACTGAGCCGCGCTCCGCTCCCTCACGGCTCTCTGACCGAGACCTCCACCAAAATAGAGATGCCAAACAGAGGACACTGA

Function

symbol description
p2ry13 Predicted to enable G protein-coupled purinergic nucleotide receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human P2RY13 (purinergic receptor P2Y13).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0045028 G protein-coupled purinergic nucleotide receptor activity molecular_function

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04030 G protein-coupled receptors

ZFIN:

id description
ZDB-GENE-110208-5 Predicted to enable G protein-coupled purinergic nucleotide receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human P2RY13 (purinergic receptor P2Y13).

Ensembl:

ensembl_id ENSDARG00000069944

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016586 False 2906 mRNA 0.47 3 1134870 1142663
TCONS_00016587 True 1008 mRNA 0.56 2 1137337 1140834

Neighbor

gene id symbol gene type direction distance location
XLOC_008220 p2ry12 coding upstream 14449 1116664 ~ 1120421 (+)
XLOC_008219 igsf10 coding upstream 27762 1086656 ~ 1107108 (+)
XLOC_008218 CU571333.1 coding upstream 55766 1078989 ~ 1079104 (+)
XLOC_008217 znf1007 coding upstream 141437 983741 ~ 993433 (+)
XLOC_008216 alox5b.2 coding upstream 158517 963292 ~ 976353 (+)
XLOC_008222 mlf1 coding downstream 5411 1148074 ~ 1162658 (+)
XLOC_008223 gfm1 coding downstream 24456 1167119 ~ 1195012 (+)
XLOC_008224 mfsd1 coding downstream 56744 1199407 ~ 1220123 (+)
XLOC_008225 NA coding downstream 79154 1221817 ~ 1234693 (+)
XLOC_008226 schip1 coding downstream 229680 1372343 ~ 1436707 (+)
XLOC_008463 BX663520.1 misc downstream 20109528 21252191 ~ 21252282 (+)
XLOC_008206 NA non-coding upstream 366435 768181 ~ 768435 (+)
XLOC_008204 NA non-coding upstream 465426 658362 ~ 669444 (+)
XLOC_008200 NA non-coding upstream 586989 546153 ~ 547881 (+)
XLOC_008197 NA non-coding upstream 635047 497208 ~ 499823 (+)
XLOC_008229 dre-mir-15c non-coding downstream 401023 1543686 ~ 1543768 (+)
XLOC_008230 dre-mir-16a non-coding downstream 401194 1543857 ~ 1543943 (+)
XLOC_008232 NA non-coding downstream 550534 1693197 ~ 1718629 (+)
XLOC_008236 CU638704.1 non-coding downstream 730995 1873658 ~ 1873778 (+)

Expression


Co-expression Network