CI01000021_01264188_01268643


Basic Information

Item Value
gene id CI01000021_01264188_01268643
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 1262438 ~ 1268865 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_01264188_01268643.mRNA
GGATAAATACGAACTCAAACCAAGCTTAGATCGGCACTCTTGAATATAAAACATTTTTGAAGTATTGACAGAGCAAATGAGCGAATTCAGTTTAAATCACTATAGATGGGACATGCTGGAGTACATTTGGATGTTTTGGAACCAAGTAAATTCAATTTCTTTTCTTATGTGGAATTCAAATGAAGGTTCCCATAATTGTGCATATGTTGGCAAGCTGTCAGCAGAAGTGAGCAGAATTTTTGGCTATTTTTGGGCTGAAATTTCATTAAATTGGACCTGAGCATGTGCCTTCCTGGTTGGGTGTAAATGCTTCGCTAATGAAGGTAAAACTGTCCTGCAGTTCGAGCTATTTGCCTGCTTCCTTTTTTTGCAGAATTCATAGGTCATTACACTTCTAGGTGAGTTGTAGGCAGACAGTTTCGCGTTTACTCTGCCCATGCTACAACATACGGTGCGAAATCGCATACTTCCCTACTATATAGTAGGCAAAAACAGTATATGAAAAGAGTAGTATGTGCAAATTCACAGTATTCATAAAACAGTGGGTGAAAAGTACCCAGACCTACTATTTTCGGTGAGATTCGGCCATGGGAGAAAAGTTATGAATGGCAGTGAAACTATGCTGATGCTGTAGGTCACATGACAATGATAACATGGCAAATGTAGTACATCCGGATTACATTCATACTACAGTAGTCAACATTTGAAGCGGATCAAAATATTTCAAAGTTGTCCTAAGAAGAAAGTTTTAGGACAGCTTCAAATGTTGACTACTGTATATAGAATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAACAGTGACGAAGTAATTACTTATTCAAAAGAAGTACATACTTCTTTGTACTTGTGAGTATGCAATTTCGAATGCATTGTTCTAAGACTAATGTGTCTTCCAAACCACACAAAAACATTGTTACCAATCAGGTATCATTAAGGGAACAAAACAAGTTTGTACCGTTTCCCTCAGAAAAGACACCCTATGACATGGCAGCTGGTGGTTAACCTCAGTTGGCCAGCAAACCTGTGCTAGTTTCTCTTGAGTCTGGTGTATCATGAGCTATAATAGCATAACGTGATTTCCTGTATCCTCTCAACTACTCACTGTTTCTACATTCAGATGAGAATTTTCTCCCTGTAGTTTCCATTAGATTGGGAAACCAACCGTAGGACATGTTACTTTATTTAGCTAACTAATAGAAGAGATGTGAAAGTTAGTTTATTTTTAAGGCGAAGCCCCTGACCTGTGATCAGTGTTTTAATTTCTATTGTAATGGACCATGGTTGGTGGTAATTAGTTCAAATGCCTGCCCCAGATCCTATCACTCAAACCTACACCACATTTTCACTTACGCCCAAAGAAGTTTTACAACAGCCATCAAAGCACCCAAGTGCACTTTAGTTGATAATTTTACAAATGAGAGAATGACAATGGACTAATGTTGATGTGAACCATACATTCAGTTTCAGTAGCTGTTAATTGAAGAGGAGTTTGCAGCACAGCTACTGTATATTAACACATTGCAGACACGAAGAAAGAGAAATGAGAGGGTGATGTGTGCTGGATGGGAGTGGACAGTGTAGGAGTGGAGAATTCCAGGAATCTGTTCGTGGTTGTGCATTACTGTAGCTTGTGCATCTGTCCACTTAGCGCTTAACCAGCAACTCCGGCATATTCCCAACAACAGGAGTCCGCAAAAATTCTTCTCCAAAAAAAAAAAAAGACAAAATGAACATTCAGAAACAGTGGCTCACATATACTGGCTATTCAGATGACCTTGTATATAGTATAGGTCTAGCACAGTCTACTCTTCCTCCTCTTCCTCTTCTACTGCCGCCTCCGCCATCAGTGCTGCGGCCCCCAGGGGCCCTCGATATGTCACAGTCTGGGGGCCCCCCAGACAAGCTCTATGCGGAACAGGCCCTGAAGGCCTCACCCACTGAGGAGGAAATGCAAGAGGAAGACAACAGTCTAAATAACAATGCAGGGCTGGAGCGCATCCAGGTTCCTGTAGAGGAAGATCAGATGGTGGAGGAGAAGCATGGAGTGTGTGTGGCGGAGGTGCAGGGCGGAGGGCCGGGCTGGCGGCAGGAGCTCGCCTGCTCTCTGTGTAAGCAACTGTTTAGCAGCCTGCTTCAACTGAGACAGCACGAATACAGCCACACGCTCTCGCTCATGGCCCTCTCGCTGGACTGCCTCGACCACCATCGCCCCATAGTGGCCGCGTCACCGCTCAACCCTCCGCCAGCACGCTACCACTGCTCGCAGTGTCCCGCCAGCTTCACTCTCAAGTCCAACGCCGACCGCCATGAGAAGACCATCCACCTCAAACGGAAGCTGATGCAGTGCGTGTACTGCCTCAAGCACTTTCGTGACCGCACGGACCTGAACCGCCACCTGTCATCCGTGCATTCCAGCGAGCGCGTGTACACGTGCCCCGCTTGCTCCCGAACCTTCAGCACGCAGAAAAACCTGGCCACCCATGGCAAGGTTTGCTGTCAGTCGGGAATCTCGCCCACCGAGCAGCTGTGGAATCTGCACGGCTTAAGGGAAGATGACCACGACCACATCCGTATAGACGACTGATTCTCCAAACCAGCAAAACTCTTTATTTCAATAAGGGAATGTTTTAAAAACTTCAGGTCATCCCAATTCAGGCCTTTCCCAACTTTGAGCCACAGCACTGTTGACATTTCTACATTTCTTTTTTAACTGTATGTCAGATTTATATGTTTTTGAAATATCTAAATCGTCAGGTTTTTTATGACTACTGCATATGGCTGCTGATCGGCACAACTGCTATGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_01264188_01268643.mRNA True 2830 mRNA 0.44 4 1262438 1268865

Neighbor

gene id symbol gene type direction distance location
CI01000021_01219723_01256723 ZBTB46 coding upstream 5358 1219723 ~ 1257080 (+)
CI01000021_01129847_01154032 UCKL1B, UCKL1 coding upstream 108130 1129847 ~ 1154308 (+)
CI01000021_01100408_01104630 NA coding upstream 157808 1100408 ~ 1104630 (+)
CI01000021_00972210_01064592 SAMD10 coding upstream 197723 971213 ~ 1064715 (+)
CI01000021_00822848_00831637 NA coding upstream 430758 822848 ~ 831680 (+)
CI01000021_01274202_01280110 NA coding downstream 4729 1273594 ~ 1281759 (+)
CI01000021_01288735_01291953 LMOD3 coding downstream 19731 1288596 ~ 1291962 (+)
CI01000021_01332646_01333910 NA coding downstream 62800 1331665 ~ 1333951 (+)
CI01000021_01463736_01472529 CACNB3, CACNB3A, CACNB3B coding downstream 194871 1463736 ~ 1472886 (+)
CI01000021_01506852_01513139 BIRC7 coding downstream 237351 1506216 ~ 1513306 (+)
G115759 NA non-coding upstream 72727 1189482 ~ 1189711 (+)
G115754 NA non-coding upstream 77502 1184669 ~ 1184936 (+)
G115750 NA non-coding upstream 80490 1181724 ~ 1181948 (+)
G115685 NA non-coding upstream 147102 1110455 ~ 1115336 (+)
G115721 NA non-coding upstream 368479 893528 ~ 893959 (+)
G115684 NA non-coding downstream 42962 1311827 ~ 1316148 (+)
G115791 NA non-coding downstream 116074 1384939 ~ 1386229 (+)
G115780 NA non-coding downstream 139338 1408203 ~ 1408451 (+)
G115817 NA non-coding downstream 141462 1410327 ~ 1410607 (+)
G115824 NA non-coding downstream 157610 1426475 ~ 1426764 (+)
G115519 NA other upstream 778474 480530 ~ 483964 (+)
G116236 NA other downstream 1020952 2289817 ~ 2297195 (+)
G117237 NA other downstream 1968989 3237854 ~ 3243364 (+)
G117202 NA other downstream 2000279 3269144 ~ 3328233 (+)
G117484 NA other downstream 2687281 3956146 ~ 3957752 (+)

Expression


Co-expression Network