CI01000021_01506852_01513139 (BIRC7)


Basic Information

Item Value
gene id CI01000021_01506852_01513139
gene name BIRC7
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 1506216 ~ 1513306 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_01506852_01513139.mRNA
GTATATATTGCAATGACAAAATGCACTGGAGTTTTCATAATATCGTCTAACTCCACACTGAAGGAGCAGCATTGAGCACAGCAATGGCATGCTCCCTTCAATAAACAAAACCTTTAAGAACCAGAACAAGACTATAACGATTAAAACCAATTCATTAAGAACATGTACAACTGTGCTGTTATTAAAAATAGAAGAAATTTCATAGAGTTACTTACTTTAGGGATCAAAATGAAGGCGCTTGCGAAGCCTGTGCGTTTCACTAAGCCGCCATTATGTTTGACGACAACATATGACGGACTTCCTGTGAGGAATTATGGGAGATGTAGTCCAAAACTACTTTCAAAAGCCCTGAATTTGCTATAATAATAATAATAATAATGTAAAGGAGAATTCTGTTTCCCGAAATGTATTTATTTTATGCTTTTGTTTATTCATTTTGTAAAATTTTGTTTATGCGCAATTTTGTAAAATTTCAAATTATGTAATTATTTAAATTATGATAAATCATTTAGGCCTATAATAAACACCGCTATATTTCATAAAAATAGTCCATTTTAATTTCATGGTGACTTTAAAATGTATAATCCACTAGGTTGTTTTTAACCCAGCCACATGTGAAATTTGGAAAAAATCACCATGAAAGGCGTCTATTGTATATATGCTATTCAGGGCTTGGCCACAGGGCAGATCATTTTAACAACTGCTTATTCTGGAAATGTGTGTGCTATAGTAAACGGTGCTCTGTTACAGGGAATAATAGGCTATATGGCCAGCGAAGGGGGAGCTGGAGCACACTTGAACAGTCCATTATGGAAGGTGAGCAGGATGAGGGGAGATCGTGGACATGAGCGCGAGAGCAGCGCGCGGATGGAGGCGGGGGTTCGGCTCGGGATGCGGAGTGAGGAGGAAAGACTCCAGACTTTTCACAACTGGCCCAGAGATGTGCCCGTGAGCCCTGCTGAGCTAGCCCGGGCTGGCTTTCATTATCTGGGATACGGGGACACGGTGCAGTGCTTCTGCTGTGATGGGATCCTGAGGCACTGGGTTCATGGAGACACTCCGCGGGGGGAGCATGAGAGGCACTTCCCCGCATGCGGCTTAATGATGGGTAGGGATGTGGGGAATGTTCCGCTGGGCTCGTCCGACTCTGTGGATGGGCAGCTCTTGAGTCAACTGCAGCGGCTGACCGTGGACGAGCAGGTGTTGTCCGGGCAGGCGGCCTACCCGGAGATGGAATCAGAGGACAACAGGTTGTCCACCTACCACAACTGGCCCACAGGAGCATCAGTGCAGCCCGATACTCTGGCGCGAGCTGGATTCTTCTATACAGGTCATGGTGACAATGTGAAGTGTTTCTTCTGTGATGGTGGTCTGAGGAACTGGGAACCAGGTGATGACCCTTGGCAGGAACACGCCAAATGGTTTCCACAATGTGAATATTTGCTCCAAGCCAGAGGACGGGAATATGTGAGCAATATCCAGCAGTCTTACTTCAACATGAATGAGAGAGTGGGTGGATCTCTGTCATCAACTGCAGGAAACATTACGTCAGCAGAGGTGTTGGGTGGGCAGAGCTCAGTGGCGGCAGCCATGTTGTCTCCTGTGGTGCAGGCAGTGCTGCAGATGGGTTTCCAGCGCTCACTAGTGGAGAGCCTGGTGCAGTCACGCTACCTGCTTACTGGCTCACACTACACCTCAGTCTCTGACTTGGTGACCGACGTCCTGCAGGCCGAGGAGGAGGAAAGGCAGACGGGGGAGCCCAGACCAGAGACTGTGGAGAGTCCGCAAACGCCGAGAACGCAGGTCTCAGACAGGGAGAAAGTGCGATCAGATCTGACTCCGGAGGAACAGTTGAGACAGCTTCAGGAAGAGAGGACCTGTAAGGTCTGCATGGACAAACTCGTCTCCATGGTCTTCATCCCCTGTGGTCATCTGGTCGTCTGCACAGACTGCGCAGCCAGCCTGCGTCACTGCCCCATATGCAGGGCGGTCATTCGGGGGAGTGTGCGTGCATTCATGTCCTGAAGAGCAAACACACCTACATACACAGCAACACACTCTGTTGCACTGCTGTGTTATTAGCAAGAACCGTATAGTCTTTTAAAGGATATATAATGCTGAAATTACTATACAAATGGTGTAATCAGCTTCCAAATCAGCATCAGTGTTCTTTAAAAAGATTCTTTAAAACA

Function

symbol description
birc7 Predicted to enable cysteine-type endopeptidase inhibitor activity involved in apoptotic process and ubiquitin protein ligase activity. Predicted to be involved in negative regulation of apoptotic process; positive regulation of protein ubiquitination; and regulation of cell cycle. Predicted to be active in cytoplasm and nucleus. Orthologous to human BIRC7 (baculoviral IAP repeat containing 7).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K16061 BIRC7_8; baculoviral IAP repeat-containing protein 7/8

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_01506852_01513139.mRNA True 2192 mRNA 0.47 7 1506216 1513306

Neighbor

gene id symbol gene type direction distance location
CI01000021_01463736_01472529 CACNB3, CACNB3A, CACNB3B coding upstream 33330 1463736 ~ 1472886 (+)
CI01000021_01332646_01333910 NA coding upstream 172265 1331665 ~ 1333951 (+)
CI01000021_01288735_01291953 LMOD3 coding upstream 214254 1288596 ~ 1291962 (+)
CI01000021_01274202_01280110 NA coding upstream 224457 1273594 ~ 1281759 (+)
CI01000021_01264188_01268643 NA coding upstream 237351 1262438 ~ 1268865 (+)
CI01000021_01519982_01528860 GSS coding downstream 6676 1519982 ~ 1529105 (+)
CI01000021_01717640_01718394 NA coding downstream 204334 1717640 ~ 1718879 (+)
CI01000021_01771612_01785627 EXOSC10 coding downstream 258083 1771389 ~ 1785666 (+)
CI01000021_01977248_01980449 NA coding downstream 463633 1976939 ~ 1980506 (+)
CI01000021_02230472_02252713 NA coding downstream 716685 2229991 ~ 2253146 (+)
G115836 NA non-coding upstream 74 1496436 ~ 1506142 (+)
G115856 NA non-coding upstream 55862 1443255 ~ 1450354 (+)
G115824 NA non-coding upstream 79452 1426475 ~ 1426764 (+)
G115817 NA non-coding upstream 95609 1410327 ~ 1410607 (+)
G115780 NA non-coding upstream 97765 1408203 ~ 1408451 (+)
G115870 NA non-coding downstream 3375 1516681 ~ 1516942 (+)
G115941 NA non-coding downstream 132293 1645599 ~ 1645878 (+)
G115959 NA non-coding downstream 159164 1672470 ~ 1672810 (+)
G115968 NA non-coding downstream 256666 1769972 ~ 1770203 (+)
G115969 NA non-coding downstream 287852 1801158 ~ 1802398 (+)
G115519 NA other upstream 1022252 480530 ~ 483964 (+)
G116236 NA other downstream 776511 2289817 ~ 2297195 (+)
G117237 NA other downstream 1724548 3237854 ~ 3243364 (+)
G117202 NA other downstream 1755838 3269144 ~ 3328233 (+)
G117484 NA other downstream 2442840 3956146 ~ 3957752 (+)
G117493 NA other downstream 2519694 4033000 ~ 4035676 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021535 birc7 coding NC_007134.7 CM002907.2 14217508 ~ 14230506 (+)