CI01000021_01717640_01718394


Basic Information

Item Value
gene id CI01000021_01717640_01718394
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 1717640 ~ 1718879 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_01717640_01718394.mRNA
ATGGTGGCATTAGAGAGGCAGGTGTTTGATTTCTTGGGCTATCAGTGGGCTCCTATCCTTGCTAACTTCTTCCACATCCTGGTTGTCATCCTGGGCCTGTTTGGCACCATTCAGTACAGACCTCGCTACATAGTGGTGTTCCTCACTGGGTCAATCCATGTTGCAGCTTCACTTCAAGTTCAACAGGATTATCAAGCCTTTGGTTTAGTTGATGAGACGGGAAGCAAACTATTTTAGCTATTTCAGTTTTTAAATAGTCAATAGCCTTCAGTTTACATCATTACTCAGTAAAACCATGGCTATGTTTGAAATAGCATAATATGCTAATTTTTATTATTGCTACATTAATTTATATTCTAATTTATTTCTGTATATAGTATACTCTACAAAAGTATGTCAATTTTCTGCATGGTTCGCAAAACAATGACCTGCTAAATTTGCCAAAATGTGTAAATTACGTGGAAGAATATATTCCACAATGCAATGTACCTGTTCTTCCATTTTCAGCATGACAATGAACAAGTAATATTAGAAAAATTAAAAAATATTTTAAAAATGCTTAATGACCACGTTTATTTCCAAAATGATGCCTAGATGCTGTATGAAATTTAGTCATGTGACAACAATGCTGCATACTATTGTTTGAAACATTTATTGTTGCAAAATGCATACTTTTTCATTTACTGTCAAATATGCATTGTATTTTGCTCAGTATGCACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_01717640_01718394.mRNA True 722 mRNA 0.34 2 1717640 1718879

Neighbor

gene id symbol gene type direction distance location
CI01000021_01519982_01528860 GSS coding upstream 188535 1519982 ~ 1529105 (+)
CI01000021_01506852_01513139 BIRC7 coding upstream 204334 1506216 ~ 1513306 (+)
CI01000021_01463736_01472529 CACNB3, CACNB3A, CACNB3B coding upstream 244754 1463736 ~ 1472886 (+)
CI01000021_01332646_01333910 NA coding upstream 383689 1331665 ~ 1333951 (+)
CI01000021_01288735_01291953 LMOD3 coding upstream 425678 1288596 ~ 1291962 (+)
CI01000021_01771612_01785627 EXOSC10 coding downstream 52510 1771389 ~ 1785666 (+)
CI01000021_01977248_01980449 NA coding downstream 258060 1976939 ~ 1980506 (+)
CI01000021_02230472_02252713 NA coding downstream 511112 2229991 ~ 2253146 (+)
CI01000021_02269000_02272309 NA coding downstream 549810 2268689 ~ 2272396 (+)
CI01000021_02322467_02328819 SNX21 coding downstream 603588 2322467 ~ 2329864 (+)
G115959 NA non-coding upstream 44830 1672470 ~ 1672810 (+)
G115941 NA non-coding upstream 71762 1645599 ~ 1645878 (+)
G115870 NA non-coding upstream 200698 1516681 ~ 1516942 (+)
G115836 NA non-coding upstream 211498 1496436 ~ 1506142 (+)
G115856 NA non-coding upstream 267286 1443255 ~ 1450354 (+)
G115968 NA non-coding downstream 51093 1769972 ~ 1770203 (+)
G115969 NA non-coding downstream 82279 1801158 ~ 1802398 (+)
G115970 NA non-coding downstream 83533 1802412 ~ 1803161 (+)
G115973 NA non-coding downstream 92004 1810883 ~ 1811363 (+)
G115837 NA non-coding downstream 93067 1811946 ~ 1876510 (+)
G115519 NA other upstream 1233676 480530 ~ 483964 (+)
G116236 NA other downstream 570938 2289817 ~ 2297195 (+)
G117237 NA other downstream 1518975 3237854 ~ 3243364 (+)
G117202 NA other downstream 1550265 3269144 ~ 3328233 (+)
G117484 NA other downstream 2237267 3956146 ~ 3957752 (+)
G117493 NA other downstream 2314121 4033000 ~ 4035676 (+)

Expression


Co-expression Network