CI01000021_02269000_02272309


Basic Information

Item Value
gene id CI01000021_02269000_02272309
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 2268689 ~ 2272396 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_02269000_02272309.mRNA
TTATAAGAAAGAATTATTTGTGGCCATGAAAAATACCCTTCTCTTAGTATTAGTGAAGTTCCTAAATGTAATTTAGGGAGGAGCAAGCCCATCTAGCAGCTGCTCACCTCTCTTCAGTCTCAGCTGTTCCAGCATCATTCCAGTACGGTAGTGCCGTACTGAACAACGTCCAACACCATGGAAATTCCACAGTATTCCTTCAGACGACGAACTTCCCCCGAGACACCAACAGTCACATCTCGCGTAAGATCGGATCTCACAGATCCAAACACGGATGCTCTTTCTGAGCACTCATACAGACCACGCTCCGGATGACCACTCTCTCCTCTACCCTCAAGATCGCCCGTTTAACTGCATCTCATCAATCTTCTTCACAGACTTCATCTCTTCATTCTACCGCCGCTAATCCCCTGATTCTACCCATTTCAAATGGTCCGTCAACAGCCTACGTCAAGTCCTCTCCAGCTCTGGAATTAATTTCTCCAGCAGATCATGAAAAGCTCAACTCTACAATCTTCATTAGTTCTAACAACAGTTCCAGCATGCCAACAAACACTTCAACACCTCATAAAAGCAAGACTCAGAAGTTTCTCTTCCGACCCGATGTCCTGAACATAAACATTTGCAGCACGCTAATCCACAGACCGCTGCACGCACTTCCCCGTTCGCCGTTTTTCCGCCCAGCCAACAGCAGCAGCCGCAAAAACAGTCCTGCTGTTTTTCCCGCTCTTATCATATGCAGTTCCACTTCCCAGGCAAGAACCAACTATCCAAACTTACTCCCATCTCCCGCAGCTTTGCTCTGGATATCAGTGGCCCGTTTTCCTTTAGGGACGAGGACCTCCTTCCCCATCTGTTGTCATCCGGGGGCCCCATGTACTTTTGACTTCATGGTCCCCCATGTTGCGGACGTTGCGGCGGGGTGTACTCCAACCACGTACTCAAACCTCCACTGTCATAGCAGTGCAGCGGCAAGATGCATCCTAGTCAAACTTCTACAAGCCCCATGCTGTTCACACAGCAGCAACAAACGCAAGCTCCCGACGGAGTTCTTTAAATACTAAAACTGCCACAGCAGAAGCCTGCTCATAGCTCCACATAGTGGACATAGTAGGGCGAAGCGTTCCAGCCCAACTCCCGCAGGAGCCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_02269000_02272309.mRNA True 1151 mRNA 0.49 2 2268689 2272396

Neighbor

gene id symbol gene type direction distance location
CI01000021_02230472_02252713 NA coding upstream 15543 2229991 ~ 2253146 (+)
CI01000021_01977248_01980449 NA coding upstream 288183 1976939 ~ 1980506 (+)
CI01000021_01771612_01785627 EXOSC10 coding upstream 483023 1771389 ~ 1785666 (+)
CI01000021_01717640_01718394 NA coding upstream 549810 1717640 ~ 1718879 (+)
CI01000021_01519982_01528860 GSS coding upstream 739584 1519982 ~ 1529105 (+)
CI01000021_02322467_02328819 SNX21 coding downstream 50071 2322467 ~ 2329864 (+)
CI01000021_02331361_02334546 NA coding downstream 58754 2331150 ~ 2334622 (+)
CI01000021_02346223_02369457 NA coding downstream 73609 2346005 ~ 2371089 (+)
CI01000021_02378299_02383589 NA coding downstream 105648 2378044 ~ 2383760 (+)
CI01000021_02402058_02447882 PHACTR3A coding downstream 129283 2401679 ~ 2447882 (+)
G116217 NA non-coding upstream 17404 2250984 ~ 2251285 (+)
G116216 NA non-coding upstream 20159 2248266 ~ 2248530 (+)
G116185 NA non-coding upstream 57986 2210464 ~ 2210703 (+)
G116167 NA non-coding upstream 89137 2179160 ~ 2179552 (+)
G116163 NA non-coding upstream 92704 2175781 ~ 2175985 (+)
G116231 NA non-coding downstream 12980 2285376 ~ 2285643 (+)
G116245 NA non-coding downstream 24939 2297335 ~ 2297567 (+)
G116246 NA non-coding downstream 34004 2306400 ~ 2306639 (+)
G116253 NA non-coding downstream 79125 2351521 ~ 2351780 (+)
G116243 NA non-coding downstream 132861 2405257 ~ 2408394 (+)
CI01000021_01332646_01333910 NA other upstream 934280 1331665 ~ 1333951 (+)
G115519 NA other upstream 1784725 480530 ~ 483964 (+)
G116236 NA other downstream 17421 2289817 ~ 2297195 (+)
G117237 NA other downstream 965458 3237854 ~ 3243364 (+)
G117202 NA other downstream 996748 3269144 ~ 3328233 (+)
G117484 NA other downstream 1683750 3956146 ~ 3957752 (+)
G117493 NA other downstream 1760604 4033000 ~ 4035676 (+)

Expression


Co-expression Network