CI01000021_02331361_02334546


Basic Information

Item Value
gene id CI01000021_02331361_02334546
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 2331150 ~ 2334622 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_02331361_02334546.mRNA
CTTTTAAAGCGAGTTAAAGTCGAAAAAAGCACCAGCATTCGTGTTTTTAATGTTAACTGATGTTTTCATGCAGCAACACGGGTTTTTTTTTTTTTTTTGTATACCTCGCGCAAGGACCTTGAAGCCTCACAGACTCGCTCTCCGCCCCTCCTGACTCACGAATTCAGCGCTTTTTCCAGCAGAGTTCATTGTGTGATAGCAGGTCGAGAAGATGACAGCTCGAGTGTACTGCTCGGTTAGTGCTGTGTTATTGTGTCTGTCTGGATGCTTGTGCACAACAGATGCTGCTCCAGGACGAAACTTCACAGTGGCCGGTCACTGTCCGAGGAAGCTGACGGTCGTGCCTTCCAGTCGAGGATGTGCTTCTGATAGAGACTGCTCTGGAGGACACAGATGCTGTGTATTTGACTGTGGCGCTGTGTGTGTGCCACCTGCTTTCACAAAGCCAGGAGTGTGTCCACGCAGAAAATCTGGAGCAGGAGTGTGTGCCGAGTACTGTGCCAATGACAGTGACTGTCCCAACAATGAGAAATGCTGCAGCAATGGATGTGGACATGAATGTACAGCTCCATATACAGGAGCTTGGCAGCAAAAGGGTCAAAATAATTGTCAGCAAATCATGACAGTGATGGAAAAGCCTTGAACTGATGTACTAAGCCACCAGAAATTGATGAATCAAAGAATGCAGATTAACGTTGTACTTTTGGCAATTTAGTCAC

Function

NR:

description
ovulatory protein-2 precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_02331361_02334546.mRNA True 719 mRNA 0.47 4 2331150 2334622

Neighbor

gene id symbol gene type direction distance location
CI01000021_02322467_02328819 SNX21 coding upstream 1286 2322467 ~ 2329864 (+)
CI01000021_02269000_02272309 NA coding upstream 58754 2268689 ~ 2272396 (+)
CI01000021_02230472_02252713 NA coding upstream 78004 2229991 ~ 2253146 (+)
CI01000021_01977248_01980449 NA coding upstream 350644 1976939 ~ 1980506 (+)
CI01000021_01771612_01785627 EXOSC10 coding upstream 545484 1771389 ~ 1785666 (+)
CI01000021_02346223_02369457 NA coding downstream 11383 2346005 ~ 2371089 (+)
CI01000021_02378299_02383589 NA coding downstream 43422 2378044 ~ 2383760 (+)
CI01000021_02402058_02447882 PHACTR3A coding downstream 67057 2401679 ~ 2447882 (+)
CI01000021_02495559_02501217 FAM217B coding downstream 160937 2495559 ~ 2501727 (+)
CI01000021_02581650_02610697 NA coding downstream 247028 2581650 ~ 2611607 (+)
G116246 NA non-coding upstream 24511 2306400 ~ 2306639 (+)
G116245 NA non-coding upstream 33583 2297335 ~ 2297567 (+)
G116231 NA non-coding upstream 45507 2285376 ~ 2285643 (+)
G116217 NA non-coding upstream 79865 2250984 ~ 2251285 (+)
G116216 NA non-coding upstream 82620 2248266 ~ 2248530 (+)
G116253 NA non-coding downstream 16899 2351521 ~ 2351780 (+)
G116243 NA non-coding downstream 70635 2405257 ~ 2408394 (+)
G116320 NA non-coding downstream 200466 2535088 ~ 2535564 (+)
G116324 NA non-coding downstream 205492 2540114 ~ 2540328 (+)
G116277 NA non-coding downstream 208583 2543205 ~ 2579519 (+)
G116236 NA other upstream 33955 2289817 ~ 2297195 (+)
CI01000021_01332646_01333910 NA other upstream 996741 1331665 ~ 1333951 (+)
G115519 NA other upstream 1847186 480530 ~ 483964 (+)
G117237 NA other downstream 903232 3237854 ~ 3243364 (+)
G117202 NA other downstream 934522 3269144 ~ 3328233 (+)
G117484 NA other downstream 1621524 3956146 ~ 3957752 (+)
G117493 NA other downstream 1698378 4033000 ~ 4035676 (+)
CI01000021_04886787_04893309 PLAGL2 other downstream 2508111 4886337 ~ 4893474 (+)

Expression


Co-expression Network