CI01000024_05125128_05131366


Basic Information

Item Value
gene id CI01000024_05125128_05131366
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 5125123 ~ 5131366 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_05125128_05131366.mRNA
ATGAACACCAGCAGCAATGTAACCTTACCGGTGAACGGCACAGACGTGGGAGACAGCTGGGCCTGGATCGTGGAGTCTGTTGTCATATTAGTCATTGCCTTGTTTGTCTGTCTGGGCAATTTGCTTGTTGTGTTGACCCTTTATCGGAAACCCTACCTCTTAACGCCAAGCAACAAGTTTGTCTTCAGCCTGACACTTTCCAACCTCCTGTTGTCGTTACTGGTGCTGCCATTTGTTGTTGCCAGCTCTCTTAATGGAGAATGGCTGTTTGGCGTTGTATGGTGCAACTTCACGGCACTGTTATATCTGCTCATCAGCTCTGCCAGCATGCTCACGTTGGGAGCTATTGCCATTGACAGGTACTATGCTGTGCTGTTTCCAATGGTCTACCCTGTCAAGATCACAGGTAATCGTGCAGCAGTGGCCATTGTCTACCTGTGGCTGCATTCTCTGGTGGGCTGCCTGCCTCCTCTGTTCGGCTGGTCCACATTTGAGTTTGACCATTTCAAGAAGACATGCACTGTGGCCTGGTATCGTGAAGTCAGCTACACTGCATTCTGGGTTGCGTGGTGCTGCCTGATTCCACTGTTTGCCATGCTGGTGTGCTACAGCCTCATCTTTCGTGTGGCACGGCACAAAGCTCGCAAGGTGCACTGCGGGACGGTTGTGGTGGTTCAAGTGCCCGCATCCTCCAATAGGAATGGACGAAAGAACTCCACCGCCTCGGTTTCTTCCATCGGGAGTCGTAAAGGTTTGATCTACGCTGGCAGCCAGTGTAAAGCCCTGGTCACCATTTTGGTGGTGGTCGGCACCTTCTTGATGACATGGGGGCCGTATGTGATAGTGATCTTCACCGAGGCGGTATCGGGGCGAGGAAGTGTGTCATCTGGACTGGAGACAATGGTGACCTGGCTGTCGTTTGTCAGTGCTGCCTGTCATCCTCTCATATACGGGCTGTGGAATAAAACTGTAAGGAAAGAGCTGCTTGGCATGTGCTGTGGTGACCGTCACTATCGGGAATCATTCATTAGCCGCCACAGGAAGTCCCGCCTCTTTAGCATCTCCAACCGAATCACAGATCTTGGTATGTCTCCACACCTGACGGCCATGTTGGCTGGTGGAGGCCAGCTTTTAGGTGCTGGTAGTAGCACAGGAGACACTGGCTTCAGTTTTTCCCAGGACTCAGGTACAGATATCATGTTGCTGGATAACTGTTCTGAGGGAGCAGAAAGCTCACACTACAGTGCTTTATTCAACAAGCGCAAGGGTTCAGTAATGTTTGAGGACCAGGTGGAACAGCAGTCTAAAGCTGGTGAGGATCAGTCTCAGCACCTGGTGAAGGCGGAGATACACCAGGTGATTGACAGCTTTGCGTCCAGTATGGCAAAAGCCATAGAGAGCGATGCCAAACTTCTGCTGTTCGGTACGGAGTCTCTGACTGACAATATTTCATCGGTTCAGCCCGCACAGAGGGGCTTGCGCTACCCAGATGGCCAGAGGGTCCGTCTGGAGAGCATCGATGAGGGAATTGTTAAAGATGAAAAGGGTGAAGACGACGAAGATGAAATCGAGGAAATATGTGCATAAATAAA

Function

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_05125128_05131366.mRNA True 1592 mRNA 0.51 5 5125123 5131366

Neighbor

gene id symbol gene type direction distance location
CI01000024_05023856_05045877 DZIP1 coding downstream 78980 5023681 ~ 5046143 (-)
CI01000024_04952720_04980663 ABCC4 coding downstream 144460 4952477 ~ 4980663 (-)
CI01000024_04934952_04935671 SOX21A coding downstream 189283 4934868 ~ 4935840 (-)
CI01000024_04921413_04932000 NA coding downstream 193123 4920795 ~ 4932000 (-)
CI01000024_04900693_04903891 ARF2B, ARF3A, ARF1L, ARF3, ARF2, ARF1, ARF3.S, ARF5, ARF2A, ARF5.L coding downstream 221157 4899850 ~ 4903966 (-)
CI01000024_05231804_05251647 NA coding upstream 99898 5231264 ~ 5251647 (-)
CI01000024_05253329_05288232 RAPGEF4 coding upstream 121072 5252438 ~ 5288232 (-)
CI01000024_05295273_05311854 NA coding upstream 163829 5295195 ~ 5311854 (-)
CI01000024_05317964_05322464 DTD1 coding upstream 186022 5317388 ~ 5322464 (-)
CI01000024_05323160_05334951 SEC23B coding upstream 191755 5322896 ~ 5334951 (-)
G124099 NA non-coding downstream 10539 5114363 ~ 5114584 (-)
G123748 NA non-coding downstream 206071 4914340 ~ 4919052 (-)
G124044 NA non-coding downstream 214180 4910730 ~ 4910943 (-)
G124042 NA non-coding downstream 218283 4906555 ~ 4906840 (-)
G123757 NA non-coding downstream 226443 4896544 ~ 4898680 (-)
G124082 NA non-coding upstream 8536 5139902 ~ 5142817 (-)
G124105 NA non-coding upstream 14142 5145508 ~ 5147093 (-)
G124133 NA non-coding upstream 32359 5163725 ~ 5163956 (-)
G124140 NA non-coding upstream 81022 5212388 ~ 5212781 (-)
G124120 NA non-coding upstream 81620 5212986 ~ 5214823 (-)
CI01000024_03938368_03941795 NA other downstream 1183199 3938315 ~ 3941924 (-)
G123233 NA other downstream 2570087 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 4298272 824968 ~ 838550 (-)
G125457 NA other upstream 2225871 7357237 ~ 7358104 (-)
G125798 NA other upstream 2844301 7975667 ~ 7976047 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031819 GPR161 coding NC_007117.7 CM002890.2 7123980 ~ 7133531 (+)
bowfin (Amia calva) AMCG00014331 NA coding CM030128.1 CM030128.1 9358847 ~ 9367036 (-)