CI01000026_02318608_02319349


Basic Information

Item Value
gene id CI01000026_02318608_02319349
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 2318608 ~ 2319874 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_02318608_02319349.mRNA
GAATAAGGACATTAAGCAAGATCTAGTGAAAGAATGGTTAGATGATGACTTTGAGTGGCCACCACAAAAGAAAACATCAAACTCAGTTGGCATGTATGATAATCCAGTATACTCACCGGGAGGCATGCATAAGCAGAACAGTTTAGAAAAATATAAACCAAATTTCTCTATGGATCGATACTACACCCAGAATTTCTCACCTGAACCTGATATTAATCTCCGGAATCTTCAGAGAGATCAGTTTATGAAAATGAACAAACCTCAGATCCGGACATCTTTTGATATTTAAGTGTGATATTCGAAATGTATGGAATTTAACACAAGTAGAATGGCTCTGTTTGACGTATTGAATGTATCTGTTGCTTGGATGCTTTAAAAATATCCAGTCTTGATGTATCAATCCCAAATCTATTAGGAGAGAGTTCTATTTATACCATAAAATTTAGTAATAGTACAATTGTGCATATTTTCTGTATCTCAGATGTGTGACAAACATTGTCCGACTATATTGTGTTTGATCACATGATGAAGAGAAGCAGTGAAACTTTAGAAAAGCCCTGCTTCCCTTCAGATATGTTATCAAAATAATGAAGGTAGCAAAATAAGAATATAGTGTAGAGCTATATCATTTTTACAGGTTTTACTTTGTTAGTGCTCCTTCAGGAGTCCTTGTGTTTTATTATTGTTGTTCTTTATCACATAGTATTAATATGAATTAGTTTGTAAATTACATATTAACCACAAATTATTTATTATCATTATATTCCACACGTTTGTAAATTTTGTAAATTGACACTTGCTTATGTTCAAATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_02318608_02319349.mRNA True 814 mRNA 0.32 3 2318608 2319874

Neighbor

gene id symbol gene type direction distance location
CI01000026_02249557_02256584 NA coding upstream 61622 2247478 ~ 2256986 (+)
CI01000026_02230639_02246622 ALOX15, ALOX12 coding upstream 71513 2230175 ~ 2247095 (+)
CI01000026_02198750_02225249 PELP1 coding upstream 92928 2198308 ~ 2225680 (+)
CI01000026_02150810_02194735 ARRB2, ARRB2B coding upstream 122543 2150040 ~ 2196065 (+)
CI01000026_02097643_02120853 MTMR1A coding upstream 197153 2097454 ~ 2121455 (+)
CI01000026_02332785_02336722 NAT16 coding downstream 12329 2332203 ~ 2336946 (+)
CI01000026_02351177_02371429 NA coding downstream 31230 2351104 ~ 2371818 (+)
CI01000026_02400893_02403816 VGF coding downstream 80015 2399889 ~ 2403831 (+)
CI01000026_02476591_02498283 NA coding downstream 156717 2476591 ~ 2498501 (+)
CI01000026_02559910_02563125 MPDU1B coding downstream 239969 2559843 ~ 2563679 (+)
G127574 NA non-coding upstream 18773 2299273 ~ 2299835 (+)
G127567 NA non-coding upstream 36250 2282131 ~ 2282358 (+)
G127545 NA non-coding upstream 52461 2259258 ~ 2266147 (+)
G127558 NA non-coding upstream 175992 2142402 ~ 2142616 (+)
G127557 NA non-coding upstream 176783 2141610 ~ 2141825 (+)
G127591 NA non-coding downstream 61743 2381617 ~ 2381953 (+)
G127593 NA non-coding downstream 63217 2383091 ~ 2383341 (+)
G127597 NA non-coding downstream 67449 2387323 ~ 2387583 (+)
G127519 NA non-coding downstream 73809 2393683 ~ 2427006 (+)
G127608 NA non-coding downstream 118200 2438074 ~ 2438370 (+)
G127531 NA other upstream 6473 2309322 ~ 2312135 (+)
G127500 NA other upstream 372169 1931183 ~ 1946439 (+)
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S other upstream 1540811 776757 ~ 777830 (+)
G126556 NA other upstream 1563445 754791 ~ 755163 (+)
CI01000026_02659356_02660297 NA other downstream 339341 2658605 ~ 2660829 (+)
G127979 NA other downstream 1432677 3752551 ~ 3762986 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other downstream 1967999 4327206 ~ 4332085 (+)
G128137 NA other downstream 2110688 4430562 ~ 4431201 (+)

Expression


Co-expression Network