CI01000026_02332785_02336722 (NAT16)


Basic Information

Item Value
gene id CI01000026_02332785_02336722
gene name NAT16
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 2332203 ~ 2336946 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_02332785_02336722.mRNA
TTATATAACACATCTCATTGAAAGATGTCATGCCCACTATCTATATATTCACAGACACTAATTAAAACATTGGTGCTAAAGTCCATAGATAAGTTAAGTTTAATCTTCAAAAGAACTAAATAATAAAAAATAAAAAAAAATCACAATTGTTTGCAACTCATTAACGGACCCGTTATGCAGCCTCAAAGATTCCACTAACCTGATGGAATTTGCTAATTGGTGTTTTGATATTTTGTTCTCTTATTGAGATAAATTAATTTGGGGTTAATAAGGGTTACCAGACATAGACCGAGCATGAGTTAGGTTAGGGAATCTAGGGAAACACATTGATTCGGCCCAATGGAAATATCAGACATCTGTCCAGTTTAAACGAACTATATCCCATTACAAATTGAAGGGCAAATGAAAGACTAAGAGAGACAGTCACATGGAAATTTGGAAATCGAATATTGCATAGCAATTGGCTAGTGAACCACGAATGAATGGTTTTTGTCAGCCTCAAAAAATGCTGCCCAATAGATGTTTGCCAAACCCAAATAAGCTTTCGAACATGAAGGGTTTTCCCATTACAGTAGTGCATCAATGGAAAAGTACCAGGGCTTTCTCAACCGTGTTTCTCACACTGCACGGATTTTCTGCCTTTCAATCCCCGACACTCACTACCCATATATGCGTGCCTGCACACATCTGCCTACCCATCCGCTCTACCTTCCCCTGGATGTCTCGCGCCATTATTTTACAAGTCCTTTCAAAAAATGTGTTTATTTTCCACTCGGAACCAGGGCAATGCTGCTCATTCTAAGGATGAAGATTGAAAATGGCCTGCCTTGCTCTCAGCTCCCTGAGGCCCCTCCTCAGACCGGCCTGCAGTTTACAGTGGCGACAGAAGAGGACTTTGATGATATCATGGCCATGAGCAAGGATATCTATGGTGGCCTGGATTATCTGCCCTCCCGCTATCAAGCGTGGCTGCAAGAGAGCAACCGCACTGTCATTTTGGCTCGCAAGCAAGGCAAAGTGGAGAGGGGGAAAGGTGTGGCAGGGGTACTTCTTCGGTTTTGCTCTCAATTGGTTAAGTCCAGGTACCCTGACGTTAAAGTCAGCAGATTGACAAGAGATGACCAACTGGGACCAAAAGACTTCCAGAAATACCGGCTCATCACCAAACAGGGAATCCTCCTGGTGCGCTTCCATGCTGAAGACATAAAATTACGCCTTGCTGATCTTGGGCCTAATATCACTATAGCAGGGGAGGGTCTGTCCACCACAAACATTCCAATCCGTTTGGAGCCAGCAGAGGTGCACCAGCTCTTCTTAAGCGATGTTCTGATGCAGGGTGTCCTTCCCAATGCCACCATCGTTCAAGATTGGCAGCCCTTCAAGCCTCTGTCTAGCAACATGGACATCCTGCTGAAGAAGGACATTGATTGGATGGTTGATGATGCCAGACGCCCAACCATGGCCAGCTTGTGCACCTTCCCGTTCCGTGTGCCAATCGGTGATGACTGGTACTACCTCAACATCGACATGTTTGGTAAAGACCTGACGCTGGCCATACAACAGCTGTTGTGCCACCTGAGGTGCCACACTGGCACTCTGAAGGGTTACGTCATGTGCCAGGTGTTCCTGGAGCCCGCGCTGTGGAAGCCGATGGCCGATTTCTTTAGGGAGACCCTTAAAGTGGAGTTGGTGAAAGAGTACACAGAGCAGTGTGTGGTGGAGTCTGATGTTGTTTAGTCAAGGAGCCTCAGAAACACCTTCCCTTGAAAATTAGACACCAAACTTACAAAATAAGAGGAAACATCTCCTTCAAATATGGCACCTAAAATATCTTCTTTAAAAGGGACAACAAAAAAACTTCAGTTCTATTCCGCTTAAATGAAAATGCGCTCATAGGATTTAATTTATTTTAACAGCAATTAATTAATTAAAATAAAATGCATGTAAGTGAACAAACTAGA

Function

symbol description
nat16 Predicted to enable N-acetyltransferase activity. Is expressed in somite. Orthologous to human NAT16 (N-acetyltransferase 16 (putative)).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_02332785_02336722.mRNA True 1961 mRNA 0.44 5 2332203 2336946

Neighbor

gene id symbol gene type direction distance location
CI01000026_02318608_02319349 NA coding upstream 12329 2318608 ~ 2319874 (+)
CI01000026_02249557_02256584 NA coding upstream 75217 2247478 ~ 2256986 (+)
CI01000026_02230639_02246622 ALOX15, ALOX12 coding upstream 85108 2230175 ~ 2247095 (+)
CI01000026_02198750_02225249 PELP1 coding upstream 106523 2198308 ~ 2225680 (+)
CI01000026_02150810_02194735 ARRB2, ARRB2B coding upstream 136138 2150040 ~ 2196065 (+)
CI01000026_02351177_02371429 NA coding downstream 14158 2351104 ~ 2371818 (+)
CI01000026_02400893_02403816 VGF coding downstream 62943 2399889 ~ 2403831 (+)
CI01000026_02476591_02498283 NA coding downstream 139645 2476591 ~ 2498501 (+)
CI01000026_02559910_02563125 MPDU1B coding downstream 222897 2559843 ~ 2563679 (+)
CI01000026_02602796_02611957 TNK2B coding downstream 265850 2602796 ~ 2612380 (+)
G127574 NA non-coding upstream 32368 2299273 ~ 2299835 (+)
G127567 NA non-coding upstream 49845 2282131 ~ 2282358 (+)
G127545 NA non-coding upstream 66056 2259258 ~ 2266147 (+)
G127558 NA non-coding upstream 189587 2142402 ~ 2142616 (+)
G127557 NA non-coding upstream 190378 2141610 ~ 2141825 (+)
G127591 NA non-coding downstream 44671 2381617 ~ 2381953 (+)
G127593 NA non-coding downstream 46145 2383091 ~ 2383341 (+)
G127597 NA non-coding downstream 50377 2387323 ~ 2387583 (+)
G127519 NA non-coding downstream 56737 2393683 ~ 2427006 (+)
G127608 NA non-coding downstream 101128 2438074 ~ 2438370 (+)
G127531 NA other upstream 20068 2309322 ~ 2312135 (+)
G127500 NA other upstream 385764 1931183 ~ 1946439 (+)
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S other upstream 1554406 776757 ~ 777830 (+)
G126556 NA other upstream 1577040 754791 ~ 755163 (+)
CI01000026_02659356_02660297 NA other downstream 322269 2658605 ~ 2660829 (+)
G127979 NA other downstream 1415605 3752551 ~ 3762986 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other downstream 1950927 4327206 ~ 4332085 (+)
G128137 NA other downstream 2093616 4430562 ~ 4431201 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00011749 NA coding CM030138.1 CM030138.1 3409473 ~ 3412144 (+)